RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 GKN2Q86XP6 184 aa20.08■□□□□ 0.81
CCDC40-206ENST00000572083 CCNJLQ8IV13 435 aa20.08■□□□□ 0.81
CCDC40-206ENST00000572083 ZSCAN1Q8NBB4 408 aa20.08■□□□□ 0.81
CCDC40-206ENST00000572083 HTR3CQ8WXA8 447 aa20.08■□□□□ 0.81
CCDC40-206ENST00000572083 PDCL3Q9H2J4 239 aa20.08■□□□□ 0.81
CCDC40-206ENST00000572083 CHD5Q8TDI0 1954 aa20.08■□□□□ 0.8
CCDC40-206ENST00000572083 NBPF19A0A087WUL8 3843 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 FOXN3O00409 490 aaPredicted RBP20.07■□□□□ 0.8
CCDC40-206ENST00000572083 TOR1BO14657 336 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 PPFIA2O75334 1257 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 RASGRP1O95267 797 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 POP4O95707 220 aaKnown RBP20.07■□□□□ 0.8
CCDC40-206ENST00000572083 PON1P27169 355 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 ETFBP38117 255 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 GABRB2P47870 512 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 MAPK10P53779 464 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 GEMIN4P57678 1058 aaKnown RBP20.07■□□□□ 0.8
CCDC40-206ENST00000572083 TLE1Q04724 770 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 CLCA4Q14CN2 919 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 RAB6CQ53S08 254 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 KCTD16Q68DU8 428 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 RWDD4Q6NW29 188 aaKnown RBP20.07■□□□□ 0.8
CCDC40-206ENST00000572083 BNIPLQ7Z465 357 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 NETO2Q8NC67 525 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 TMEM35BQ8NCS4 154 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 C18orf8Q96DM3 657 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 SEMA3CQ99985 751 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 RAB6CQ9H0N0 254 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 SIX2Q9NPC8 291 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 DNAJC12Q9UKB3 198 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 OR1A2Q9Y585 309 aa20.07■□□□□ 0.8
CCDC40-206ENST00000572083 CXorf51AA0A1B0GTR3 108 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 SFTPCP11686 197 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 SCNN1AP37088 669 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 PEX5P50542 639 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 ATP11AP98196 1134 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 LRRC14Q15048 493 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 MANEALQ5VSG8 457 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 NLRP14Q86W24 1093 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 LURAP1LQ8IV03 231 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 SFTPA2Q8IWL1 248 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 OR6C4Q8NGE1 309 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 USP7Q93009 1102 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 PDXPQ96GD0 296 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 GDAP1L1Q96MZ0 367 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 KLQ9UEF7 1012 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 OR12D3Q9UGF7 316 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 HPCAL4Q9UM19 191 aa20.06■□□□□ 0.8
CCDC40-206ENST00000572083 LRRK1Q38SD2 2015 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 C9orf172C9J069 976 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 TMCC1O94876 653 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 TIMP2P16035 220 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 HTR1BP28222 390 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 CDH5P33151 784 aaPredicted RBP20.05■□□□□ 0.8
CCDC40-206ENST00000572083 MAPKAPK2P49137 400 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 SRP54P61011 504 aaKnown RBP20.05■□□□□ 0.8
CCDC40-206ENST00000572083 NFATC4Q14934 902 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 CDO1Q16878 200 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 WSCD2Q2TBF2 565 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 TAF3Q5VWG9 929 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 TMPRSS9Q7Z410 1059 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 ZNF354CQ86Y25 554 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 EMC1Q8N766 993 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 GPR156Q8NFN8 814 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 JPH3Q8WXH2 748 aaPredicted RBP20.05■□□□□ 0.8
CCDC40-206ENST00000572083 FUCA2Q9BTY2 467 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 APOOQ9BUR5 198 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 SLC25A18Q9H1K4 315 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 TMEM51Q9NW97 253 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 NEU3Q9UQ49 428 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 PCDHB11Q9Y5F2 797 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 RNF215Q9Y6U7 377 aa20.05■□□□□ 0.8
CCDC40-206ENST00000572083 TMEM110-MUSTN1A8MSY1 372 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 FAM72CH0Y354 149 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 RAMP2O60895 175 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 FGFR1OPO95684 399 aaKnown RBP20.04■□□□□ 0.8
CCDC40-206ENST00000572083 PCCBP05166 539 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 RHOQP17081 205 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 ZFP36L1Q07352 338 aaKnown RBP20.04■□□□□ 0.8
CCDC40-206ENST00000572083 INPP5AQ14642 412 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 CERCAMQ5T4B2 595 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 PHF19Q5T6S3 580 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 FAM72AQ5TYM5 149 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 FAM72DQ6L9T8 149 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 SPRED1Q7Z699 444 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 FAM72BQ86X60 149 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 DTX1Q86Y01 620 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 ELOA2Q8IYF1 753 aaPredicted RBP20.04■□□□□ 0.8
CCDC40-206ENST00000572083 CMKLR1Q99788 373 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 MAGEB5Q9BZ81 275 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 TTYH3Q9C0H2 523 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 MAGEH1Q9H213 219 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 TMEM248Q9NWD8 314 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 TMEM59LQ9UK28 342 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 ANKRD36A6QL64 1941 aa20.04■□□□□ 0.8
CCDC40-206ENST00000572083 UNC13CQ8NB66 2214 aa20.03■□□□□ 0.8
CCDC40-206ENST00000572083 B4DGG1 531 aa20.03■□□□□ 0.8
CCDC40-206ENST00000572083 INSIG1O15503 277 aa20.03■□□□□ 0.8
CCDC40-206ENST00000572083 BUB1O43683 1085 aa20.03■□□□□ 0.8
CCDC40-206ENST00000572083 PIGNO95427 931 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms