RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 MCOLN1Q9GZU1 580 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 NKIRAS2Q9NYR9 191 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 SUCLA2Q9P2R7 463 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-222ENST00000570139 FBXL5Q9UKA1 691 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 RAD54BQ9Y620 910 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 STYXL1Q9Y6J8 313 aa7.42□□□□□ -1.22
CNOT1-222ENST00000570139 FRMPD3Q5JV73 1810 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 SMIM35A0A1B0GVV1 85 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 A0A1W2PRQ8 180 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 MBLAC1A4D2B0 266 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-222ENST00000570139 FAM90A18PA6NE21 464 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 FAM90A16PA6NEW6 464 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 C9orf118A6NHY6 69 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 SAC3D1A6NKF1 404 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 FAM90A9PA6NNJ1 464 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 FAM90A5PA8MXJ8 464 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 HAS3O00219 553 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 DCLK1O15075 740 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 SRGAP2O75044 1071 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 MFAP3LO75121 409 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 TOM1L1O75674 476 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 AKAP3O75969 853 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 ITGB1P05556 798 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 FAM90A15PP0C7V4 464 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 FAM90A14PP0C7W9 464 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 ZNF286BP0CG31 522 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 TRIM21P19474 475 aaKnown RBP7.41□□□□□ -1.22
CNOT1-222ENST00000570139 MGAT1P26572 445 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 CTGFP29279 349 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 GTF2H1P32780 548 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 POLD2P49005 469 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 PRKAG1P54619 331 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 ZNF844Q08AG5 666 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 BFSP1Q12934 665 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 CSHL1Q14406 222 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 GPR68Q15743 365 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 BAK1Q16611 211 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 TBR1Q16650 682 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 TSTQ16762 297 aaKnown RBP7.41□□□□□ -1.22
CNOT1-222ENST00000570139 EFCAB12Q6NXP0 572 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 TAF2Q6P1X5 1199 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 MTHFD1LQ6UB35 978 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 GBP6Q6ZN66 633 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 FAM43BQ6ZT52 329 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-222ENST00000570139 TRMT1LQ7Z2T5 733 aaKnown RBP7.41□□□□□ -1.22
CNOT1-222ENST00000570139 KCTD20Q7Z5Y7 419 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 ABI1Q8IZP0 508 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 CFAP52Q8N1V2 620 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 GPD1LQ8N335 351 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 NEK11Q8NG66 645 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 PRPF31Q8WWY3 499 aaKnown RBP7.41□□□□□ -1.22
CNOT1-222ENST00000570139 POMGNT1Q8WZA1 660 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 TMEM143Q96AN5 459 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 FAM81BQ96LP2 452 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 SPATA25Q9BR10 227 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 SH2D3AQ9BRG2 576 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 MTG1Q9BT17 334 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-222ENST00000570139 REXO4Q9GZR2 422 aaKnown RBP7.41□□□□□ -1.22
CNOT1-222ENST00000570139 ZNHIT6Q9NWK9 470 aaKnown RBP7.41□□□□□ -1.22
CNOT1-222ENST00000570139 ETAA1Q9NY74 926 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 MYO6Q9UM54 1294 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 CNTN6Q9UQ52 1028 aa7.41□□□□□ -1.22
CNOT1-222ENST00000570139 A0A1W2PRX2 142 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 C17orf102A2RUQ5 167 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 CLIC2O15247 247 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 EXTL3O43909 919 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 PLOD3O60568 738 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 ADAMTS4O75173 837 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 GYPCP04921 128 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 SMIM10L2AP0DMW4 78 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 SMIM10L2BP0DMW5 78 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 ALOX12P18054 663 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 HOXC8P31273 242 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 HOXD12P35452 270 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 STAT1P42224 750 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 CYP2J2P51589 502 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 CCR9P51686 369 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 DGKEP52429 567 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 AP3M2P53677 418 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 RNASE9P60153 205 aaKnown RBP7.4□□□□□ -1.22
CNOT1-222ENST00000570139 PTENP60484 403 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 ZBED6P86452 979 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 NCBP1Q09161 790 aaKnown RBP7.4□□□□□ -1.22
CNOT1-222ENST00000570139 RIN1Q13671 783 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 ERV3-1Q14264 604 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 SNRNP35Q16560 246 aaKnown RBP7.4□□□□□ -1.22
CNOT1-222ENST00000570139 DCAF17Q5H9S7 520 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-222ENST00000570139 TCERG1LQ5VWI1 586 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 DGAT2L7PQ6IED9 249 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 MFSD5Q6N075 450 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 RHPN2Q8IUC4 686 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 METTL13Q8N6R0 699 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 LSMEM1Q8N8F7 131 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 RNF149Q8NC42 400 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 MBD3L2Q8NHZ7 208 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-222ENST00000570139 CD99L2Q8TCZ2 262 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 SLC35C1Q96A29 364 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 RNF125Q96EQ8 232 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 TRIB1Q96RU8 372 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 ARHGAP39Q9C0H5 1083 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms