RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 ASIC3Q9UHC3 531 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 TPX2Q9ULW0 747 aaKnown RBP23.66■■□□□ 1.38
RAB40C-212ENST00000569575 PCDHGC4Q9Y5F7 938 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 ANKRD36A6QL64 1941 aa23.65■■□□□ 1.38
RAB40C-212ENST00000569575 NDST3O95803 873 aa23.65■■□□□ 1.38
RAB40C-212ENST00000569575 ETS1P14921 441 aa23.65■■□□□ 1.38
RAB40C-212ENST00000569575 GRIA4P48058 902 aa23.65■■□□□ 1.38
RAB40C-212ENST00000569575 NEK3P51956 506 aa23.65■■□□□ 1.38
RAB40C-212ENST00000569575 WNT3AP56704 352 aa23.65■■□□□ 1.38
RAB40C-212ENST00000569575 ERN2Q76MJ5 926 aaKnown RBP23.65■■□□□ 1.38
RAB40C-212ENST00000569575 HOOK3Q86VS8 718 aa23.65■■□□□ 1.38
RAB40C-212ENST00000569575 OR6K2Q8NGY2 324 aa23.65■■□□□ 1.38
RAB40C-212ENST00000569575 SPATA22Q8NHS9 363 aa23.65■■□□□ 1.38
RAB40C-212ENST00000569575 OXNAD1Q96HP4 312 aaPredicted RBP23.65■■□□□ 1.38
RAB40C-212ENST00000569575 BCCIPQ9P287 314 aaKnown RBP eCLIP23.65■■□□□ 1.38
RAB40C-212ENST00000569575 C16orf96A6NNT2 1141 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 RAD51CO43502 376 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 MT-CYBP00156 380 aaPredicted RBP23.64■■□□□ 1.37
RAB40C-212ENST00000569575 ZSCAN5DPP0CG00 497 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 NDUFV2P19404 249 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 ITIH2P19823 946 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 PSMD8P48556 350 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 LMAN1P49257 510 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 BASP1P80723 227 aaKnown RBP23.64■■□□□ 1.37
RAB40C-212ENST00000569575 ELP6Q0PNE2 266 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 TRAF2Q12933 501 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 FBXL19Q6PCT2 694 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 RANBP10Q6VN20 620 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 PPIL6Q8IXY8 311 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 RAVER1Q8IY67 606 aaKnown RBP23.64■■□□□ 1.37
RAB40C-212ENST00000569575 PAF1Q8N7H5 531 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 TMEM105Q8N8V8 129 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 MRGPRX2Q96LB1 330 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 TRIB3Q96RU7 358 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 OMDQ99983 421 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 WHRNQ9P202 907 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 USP36Q9P275 1121 aaKnown RBP23.64■■□□□ 1.37
RAB40C-212ENST00000569575 SARDHQ9UL12 918 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 PCDHB9Q9Y5E1 797 aa23.64■■□□□ 1.37
RAB40C-212ENST00000569575 EFCAB8A8MWE9 144 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 ANKRD66B4E2M5 251 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 AP1G1O43747 822 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 PMPCBO75439 489 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 SLU7O95391 586 aaKnown RBP23.63■■□□□ 1.37
RAB40C-212ENST00000569575 FGF1P05230 155 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 APRTP07741 180 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 XPAP23025 273 aaPredicted RBP23.63■■□□□ 1.37
RAB40C-212ENST00000569575 ADRA1AP35348 466 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 CAV1Q03135 178 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 UGP2Q16851 508 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 ZNF528Q3MIS6 628 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 NEK5Q6P3R8 708 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 PPP1R21Q6ZMI0 780 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 PGBD3Q8N328 593 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 MCUQ8NE86 351 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 HMGB4Q8WW32 186 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 SCRN2Q96FV2 425 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 SNF8Q96H20 258 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 MLPHQ9BV36 600 aaPredicted RBP23.63■■□□□ 1.37
RAB40C-212ENST00000569575 SGK2Q9HBY8 427 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 FBXL12Q9NXK8 326 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 HACD3Q9P035 362 aa23.63■■□□□ 1.37
RAB40C-212ENST00000569575 UPK3BL1B0FP48 263 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 UPK3BL2E5RIL1 263 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 K7ESF4 209 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 DNALI1O14645 258 aaPredicted RBP23.62■■□□□ 1.37
RAB40C-212ENST00000569575 MID1O15344 667 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 PIGNO95427 931 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 CPP00450 1065 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 PRLP01236 227 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 MLNP12872 115 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 IVDP26440 423 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 GKP32189 559 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 EPHB1P54762 984 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 MORF4L2Q15014 288 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 TRIP13Q15645 432 aaPredicted RBP23.62■■□□□ 1.37
RAB40C-212ENST00000569575 TMEM31Q5JXX7 168 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 ERAP2Q6P179 960 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 USP45Q70EL2 814 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 TTC7BQ86TV6 843 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 C11orf74Q86VG3 221 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 PDCD7Q8N8D1 485 aaKnown RBP23.62■■□□□ 1.37
RAB40C-212ENST00000569575 IPMKQ8NFU5 416 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 PIH1D2Q8WWB5 315 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 SEC14L1Q92503 715 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 LYSMD1Q96S90 227 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 C19orf43Q9BQ61 176 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 GORASP1Q9BQQ3 440 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 TRABDQ9H4I3 376 aa23.62■■□□□ 1.37
RAB40C-212ENST00000569575 ZDBF2Q9HCK1 2354 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 CYP2A6P11509 494 aaPredicted RBP23.61■■□□□ 1.37
RAB40C-212ENST00000569575 CALCOCO2Q13137 446 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 LAMB3Q13751 1172 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 IHHQ14623 411 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 KCNJ11Q14654 390 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 SLC1A5Q15758 541 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 DUPD1Q68J44 220 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 ANO7Q6IWH7 933 aa23.61■■□□□ 1.37
RAB40C-212ENST00000569575 KIAA1324Q6UXG2 1013 aaKnown RBP23.61■■□□□ 1.37
RAB40C-212ENST00000569575 HDDC3Q8N4P3 179 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms