RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	ARSF	P54793	590 aa		3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	PDCL	Q13371	301 aa		3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	TNFAIP1	Q13829	316 aa		3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	RBBP5	Q15291	538 aa	Known RBP	3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	OASL	Q15646	514 aa	Known RBP	3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	ME3	Q16798	604 aa		3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	AP5B1	Q2VPB7	878 aa		3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	PPP6R3	Q5H9R7	873 aa	Predicted RBP	3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	DENND1B	Q6P3S1	775 aa		3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	MON1A	Q86VX9	555 aa		3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	TRAPPC12	Q8WVT3	735 aa		3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	HERC2P3	Q9BVR0	1158 aa		3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	ENTPD7	Q9NQZ7	604 aa		3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	RASSF1	Q9NS23	344 aa		3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	TAGLN3	Q9UI15	199 aa		3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	SIX4	Q9UIU6	781 aa		3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	GAB2	Q9UQC2	676 aa		3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	SNED1	Q8TER0	1413 aa		3.42	□□□□□ -1.86
UBR1-209	ENST00000569243	ATXN2	Q99700	1313 aa	Known RBP	3.42	□□□□□ -1.86
UBR1-209	ENST00000569243		A0A1W2PS18	150 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	HMX3	A6NHT5	357 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	HNRNPCL2	B2RXH8	293 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	P2RY10	O00398	339 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	IPO5	O00410	1097 aa	Known RBP	3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	HSPA12A	O43301	675 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	CRYAA	P02489	173 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	TK1	P04183	234 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	CSF1	P09603	554 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	SRC	P12931	536 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	SSTR2	P30874	369 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	HOXC13	P31276	330 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	ADD2	P35612	726 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	ZNF132	P52740	706 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	RBM5	P52756	815 aa	Known RBP eCLIP	3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	CAPS	Q13938	189 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	CBWD5	Q5RIA9	395 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	MARK2	Q7KZI7	788 aa	Known RBP	3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	RRAGA	Q7L523	313 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	SYT13	Q7L8C5	426 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	ENAH	Q8N8S7	591 aa	Predicted RBP	3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	KCNH5	Q8NCM2	988 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	NEK9	Q8TD19	979 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	MAGEC3	Q8TD91	643 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	USP13	Q92995	863 aa	Predicted RBP	3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	FBXO17	Q96EF6	278 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	YME1L1	Q96TA2	773 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	TAF1D	Q9H5J8	278 aa	Predicted RBP	3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	HDAC6	Q9UBN7	1215 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	GRHPR	Q9UBQ7	328 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	NDRG3	Q9UGV2	375 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	VDAC3	Q9Y277	283 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	CGNL1	Q0VF96	1302 aa		3.41	□□□□□ -1.86
UBR1-209	ENST00000569243	XPNPEP2	O43895	674 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	NDUFB4	O95168	129 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	CLDN14	O95500	239 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	AFP	P02771	609 aa	Known RBP	3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	LINC00271	P0C7V0	271 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	HNF1B	P35680	557 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	BLK	P51451	505 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	ZNF155	Q12901	538 aa	Predicted RBP	3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	ZBTB17	Q13105	803 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	EFR3A	Q14156	821 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	PDCD2	Q16342	344 aa	Predicted RBP	3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	AMZ1	Q400G9	498 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	ZNF484	Q5JVG2	852 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	SYNE3	Q6ZMZ3	975 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	SHF	Q7M4L6	423 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	PRSS45	Q7RTY3	260 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	SPPL3	Q8TCT6	385 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	FIG4	Q92562	907 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	SNAPC3	Q92966	411 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	C1QTNF5	Q9BXJ0	243 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	TTC12	Q9H892	705 aa	Predicted RBP	3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	DAAM1	Q9Y4D1	1078 aa		3.4	□□□□□ -1.87
UBR1-209	ENST00000569243	hCG_1642624	A0A1W2PR95	340 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	hDV102S1	A0JD36	115 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	EDIL3	O43854	480 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	FGF17	O60258	216 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	RFPL2	O75678	378 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	ADA	P00813	363 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	CHRM4	P08173	479 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	CD58	P19256	250 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	CHAT	P28329	748 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	RYK	P34925	604 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	PTPN9	P43378	593 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	AARS	P49588	968 aa	Known RBP eCLIP	3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	PRKAA2	P54646	552 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	FCN2	Q15485	313 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	JMJD6	Q6NYC1	403 aa	Predicted RBP	3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	IL20RB	Q6UXL0	311 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	ZC3HC1	Q86WB0	502 aa	Known RBP	3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	SFR1	Q86XK3	245 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	GHDC	Q8N2G8	530 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	HSPH1	Q92598	858 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	TANK	Q92844	425 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	ZNF334	Q9HCZ1	680 aa	Predicted RBP	3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	SNX9	Q9Y5X1	595 aa		3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	COL2A1	P02458	1487 aa	Predicted RBP	3.39	□□□□□ -1.87
UBR1-209	ENST00000569243	KRTAP5-8	O75690	187 aa		3.38	□□□□□ -1.87
UBR1-209	ENST00000569243	MTA2	O94776	668 aa		3.38	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms