RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 SALL4Q9UJQ4 1053 aa15.21■□□□□ 0.03
SCAMP2-209ENST00000567638 PNMA8BQ9ULN7 279 aaPredicted RBP15.21■□□□□ 0.03
SCAMP2-209ENST00000567638 PCDHB1Q9Y5F3 818 aa15.21■□□□□ 0.03
SCAMP2-209ENST00000567638 RIOK3O14730 519 aaKnown RBP15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 TPP1O14773 563 aa15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 BRINP1O60477 761 aa15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 GZMAP12544 262 aa15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 PAPOLAP51003 745 aaKnown RBP15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 IRF4Q15306 451 aa15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 UGP2Q16851 508 aa15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 DEFB133Q30KQ1 61 aa15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 RFX8Q6ZV50 586 aa15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 CYP4V2Q6ZWL3 525 aaPredicted RBP15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 PHACTR4Q8IZ21 702 aa15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 SNIP1Q8TAD8 396 aaKnown RBP15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 IFI44Q8TCB0 444 aa15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 ZNF653Q96CK0 615 aa15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 ZNF641Q96N77 438 aaPredicted RBP15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 DEPDC7Q96QD5 511 aa15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 TUBGCP5Q96RT8 1024 aa15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 KCTD15Q96SI1 283 aaPredicted RBP15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 IL12RB2Q99665 862 aa15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 TRIM7Q9C029 511 aa15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 TCEAL2Q9H3H9 227 aaPredicted RBP15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 SUV39H2Q9H5I1 410 aa15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 CNOT8Q9UFF9 292 aaKnown RBP15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 NBEAQ8NFP9 2946 aa15.2■□□□□ 0.02
SCAMP2-209ENST00000567638 A0A1B0GTH6 734 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 DDX3XO00571 662 aaKnown RBP eCLIP15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 DAPK3O43293 454 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 PRPSAP2O60256 369 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 FTLP02792 175 aaPredicted RBP15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 ERCC2P18074 760 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 MIPP30301 263 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 ACTN2P35609 894 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 EIF4A3P38919 411 aaKnown RBP15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 RGRP47804 291 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 CSNK1DP48730 415 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 ZNF165P49910 485 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 KLHL30Q0D2K2 578 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 LRRC14Q15048 493 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 CDKN3Q16667 212 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 PRRT3Q5FWE3 981 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 PPP6R3Q5H9R7 873 aaPredicted RBP15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 CFAP58Q5T655 872 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 AFMIDQ63HM1 303 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 ERAP2Q6P179 960 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 BRAT1Q6PJG6 821 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 LRRC69Q6ZNQ3 347 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 PSTKQ8IV42 348 aaKnown RBP15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 ARHGAP12Q8IWW6 846 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 NPWQ8N729 165 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 MAPK15Q8TD08 544 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 CRELD1Q96HD1 420 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 LRRC61Q9BV99 259 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 EDEM3Q9BZQ6 932 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 ABCG4Q9H172 646 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 SP110Q9HB58 689 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 PCDH12Q9NPG4 1184 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 COQ6Q9Y2Z9 468 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 SCINQ9Y6U3 715 aa15.19■□□□□ 0.02
SCAMP2-209ENST00000567638 CPED1A4D0V7 1026 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 EME2A4GXA9 379 aaPredicted RBP15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 RRP8O43159 456 aaKnown RBP15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 LZTS3O60299 673 aaPredicted RBP15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 BUB1BO60566 1050 aaPredicted RBP15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 CSO75390 466 aaKnown RBP15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 LRCH4O75427 683 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 GCATO75600 419 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 PALMO75781 387 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 C6P13671 934 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 ITPKBP27987 946 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 MMP12P39900 470 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 PEX5P50542 639 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 ZNF135P52742 658 aaPredicted RBP15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 PPARDQ03181 441 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 C1orf61Q13536 156 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 COL9A2Q14055 689 aaPredicted RBP15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 KIF26BQ2KJY2 2108 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 WSCD2Q2TBF2 565 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 TBC1D25Q3MII6 688 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 SOWAHCQ53LP3 525 aaPredicted RBP15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 FAXCQ5TGI0 409 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 CAVIN1Q6NZI2 390 aaKnown RBP15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 GUSBP11Q6P575 273 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 EFL1Q7Z2Z2 1120 aaKnown RBP15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 SRLQ86TD4 932 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 ZSWIM9Q86XI8 627 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 CAMK1DQ8IU85 385 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 TSEN2Q8NCE0 465 aaKnown RBP15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 FGF11Q92914 225 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 TRIM11Q96F44 468 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 NAP1L5Q96NT1 182 aaPredicted RBP15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 CINPQ9BW66 212 aaPredicted RBP15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 BOCQ9BWV1 1114 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 SLC13A1Q9BZW2 595 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 ATP13A3Q9H7F0 1226 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 ATP8A1Q9Y2Q0 1164 aa15.18■□□□□ 0.02
SCAMP2-209ENST00000567638 TMEM110-MUSTN1A8MSY1 372 aa15.17■□□□□ 0.02
SCAMP2-209ENST00000567638 LMO7DNF2Z398 122 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms