RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.82□□□□□ -0.68
UBFD1-205ENST00000566136 SYNDIG1Q9H7V2 258 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 RXFP1Q9HBX9 757 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 TM7SF3Q9NS93 570 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 GPATCH2Q9NW75 528 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 WRAP73Q9P2S5 460 aaPredicted RBP10.82□□□□□ -0.68
UBFD1-205ENST00000566136 FBXO40Q9UH90 709 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 TRAF3IP3Q9Y228 551 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 PDE4DIPQ5VU43 2346 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 SSU72P8A0A1W2PR75 194 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 CALUO43852 315 aaPredicted RBP10.82□□□□□ -0.68
UBFD1-205ENST00000566136 N4BP1O75113 896 aaKnown RBP10.82□□□□□ -0.68
UBFD1-205ENST00000566136 CETPP11597 493 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 TBXAS1P24557 533 aaPredicted RBP10.82□□□□□ -0.68
UBFD1-205ENST00000566136 TUBB4BP68371 445 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 PRKCEQ02156 737 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 CHIT1Q13231 466 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 EFTUD2Q15029 972 aaKnown RBP eCLIP10.82□□□□□ -0.68
UBFD1-205ENST00000566136 CES4AQ5XG92 561 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 POC5Q8NA72 575 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 SLC13A3Q8WWT9 602 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 ALS2CR12Q96Q35 445 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 A1CFQ9NQ94 594 aaKnown RBP10.82□□□□□ -0.68
UBFD1-205ENST00000566136 ZNF212Q9UDV6 495 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 A0A087X0T9 212 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 FAM228BP0C875 321 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 ZNF81P51508 661 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 CAPSQ13938 189 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 CASP8Q14790 479 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 CEBPEQ15744 281 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 TYSND1Q2T9J0 566 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 MED25Q71SY5 747 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 CHST9Q7L1S5 443 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 PROSER1Q86XN7 944 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 PHYKPLQ8IUZ5 450 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 OR52E1Q8NGJ3 308 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 SLC22A17Q8WUG5 538 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 KCNN1Q92952 543 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 WNT2BQ93097 391 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 GAD1Q99259 594 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 ZNF577Q9BSK1 485 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 KLF16Q9BXK1 252 aaPredicted RBP10.81□□□□□ -0.68
UBFD1-205ENST00000566136 SMARCAD1Q9H4L7 1026 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 MKLN1Q9UL63 735 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 MTUS1Q9ULD2 1270 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 WDR37Q9Y2I8 494 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 MRPL11Q9Y3B7 192 aaKnown RBP10.81□□□□□ -0.68
UBFD1-205ENST00000566136 DENND3A2RUS2 1198 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 LRRIQ3A6PVS8 624 aaPredicted RBP10.81□□□□□ -0.68
UBFD1-205ENST00000566136 PEX12O00623 359 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 PDXKO00764 312 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 PJA2O43164 708 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 CCDC172P0C7W6 258 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 EPHB3P54753 998 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 KRT71Q3SY84 523 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 GJB7Q6PEY0 223 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 CCDC80Q76M96 950 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 FRMD5Q7Z6J6 570 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 KBTBD6Q86V97 674 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 SPACA9Q96E40 222 aaPredicted RBP10.81□□□□□ -0.68
UBFD1-205ENST00000566136 KREMEN1Q96MU8 473 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 OSBPL9Q96SU4 736 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 C19orf43Q9BQ61 176 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 GON7Q9BXV9 100 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 CPEB1Q9BZB8 566 aaKnown RBP10.81□□□□□ -0.68
UBFD1-205ENST00000566136 PLEKHA2Q9HB19 425 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 APPL1Q9UKG1 709 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 GRID1Q9ULK0 1009 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 DERAQ9Y315 318 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 CLDN16Q9Y5I7 305 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 KCNE2Q9Y6J6 123 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 ZMYM2Q9UBW7 1377 aa10.81□□□□□ -0.68
UBFD1-205ENST00000566136 FAM237BA0A1B0GVD1 139 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 BUB1BO60566 1050 aaPredicted RBP10.8□□□□□ -0.68
UBFD1-205ENST00000566136 RNGTTO60942 597 aaKnown RBP10.8□□□□□ -0.68
UBFD1-205ENST00000566136 NME6O75414 186 aaPredicted RBP10.8□□□□□ -0.68
UBFD1-205ENST00000566136 KLKB1P03952 638 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 NPPBP16860 134 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 ITIH2P19823 946 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 AGAP20933 346 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 KLRC1P26715 233 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 BCL6P41182 706 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 YBX1P67809 324 aaKnown RBP10.8□□□□□ -0.68
UBFD1-205ENST00000566136 ITIH3Q06033 890 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 MEP1BQ16820 701 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 TOR1AIP1Q5JTV8 583 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 KCNT1Q5JUK3 1230 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 DPY19L2P1Q6NXN4 242 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 TMPRSS7Q7RTY8 843 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 SYN2Q92777 582 aaPredicted RBP10.8□□□□□ -0.68
UBFD1-205ENST00000566136 NMD3Q96D46 503 aaKnown RBP10.8□□□□□ -0.68
UBFD1-205ENST00000566136 EID2BQ96D98 161 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 TUFT1Q9NNX1 390 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 SPASTQ9UBP0 616 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 IL19Q9UHD0 177 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 CCPG1Q9ULG6 757 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 RNF103-CHMP3A0A140T963 221 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 LRRIQ4A6NIV6 560 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 RNF103O00237 685 aa10.8□□□□□ -0.68
UBFD1-205ENST00000566136 EPB41P11171 864 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms