RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 KRT78Q8N1N4 520 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 ZNF786Q8N393 782 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 ZNF781Q8N8C0 355 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 CELF1Q92879 486 aaKnown RBP5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 SLC10A4Q96EP9 437 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 LRFN5Q96NI6 719 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 QRFPRQ96P65 431 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 OPN3Q9H1Y3 402 aaPredicted RBP5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 JMJD4Q9H9V9 463 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 RAVER2Q9HCJ3 691 aaKnown RBP5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 MRPS30Q9NP92 439 aaKnown RBP5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 NT5MQ9NPB1 228 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 INTS13Q9NVM9 706 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 IFNKQ9P0W0 207 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 VPS54Q9P1Q0 977 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 MLXQ9UH92 298 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 EIF3LQ9Y262 564 aaKnown RBP5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 NPFFR2Q9Y5X5 522 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 SLC22A7Q9Y694 548 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 CSNK1G3Q9Y6M4 447 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 TULP4Q9NRJ4 1543 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 BCL9O00512 1426 aa5.98□□□□□ -1.45
TUBGCP4-207ENST00000563963 METP08581 1390 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 PNMA6EA0A0J9YXQ4 647 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 A8MXE2 369 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 DPYSL4O14531 572 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 DOK2O60496 412 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 HUS1O60921 280 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 TNNC2P02585 160 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 CDK1P06493 297 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 TAGLN2P37802 199 aaKnown RBP5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 EIF2S3P41091 472 aaKnown RBP5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 FMR1Q06787 632 aaKnown RBP eCLIP5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 FAM189A2Q15884 450 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 PPP2R5EQ16537 467 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 CYP2A13Q16696 494 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 ZNF827Q17R98 1081 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 TMEM44Q2T9K0 475 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 NOMO2Q5JPE7 1267 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 POTEHQ6S545 545 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 ZNF783Q6ZMS7 281 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 SMIM15Q7Z3B0 74 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 GALNT4Q8N4A0 578 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 SLC13A3Q8WWT9 602 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 JADE3Q92613 823 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 GTF3AQ92664 365 aaKnown RBP5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 YIPF5Q969M3 257 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 VRK1Q99986 396 aaPredicted RBP5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 ISCUQ9H1K1 167 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 LRMDAQ9H2I8 198 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 MLXIPLQ9NP71 852 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 KCNMB3Q9NPA1 279 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 SLC35D1Q9NTN3 355 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 NKIRAS1Q9NYS0 192 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 MAN2B2Q9Y2E5 1009 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 ALS2Q96Q42 1657 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 CLUHO75153 1309 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 TRPM3Q9HCF6 1732 aaPredicted RBP5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 MYH15Q9Y2K3 1946 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 MTMR11A4FU01 709 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 A6NL46 340 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 GAS2O43903 313 aaKnown RBP5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 USP12O75317 370 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 GCATO75600 419 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 UBOX5O94941 541 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 PDGFAP04085 211 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 SBK2P0C263 348 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 RNF224P0DH78 156 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 BMP1P13497 986 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 RBL1P28749 1068 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 PRIM2P49643 509 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 RAB13P51153 203 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 VAMP2P63027 116 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 KCNC4Q03721 635 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 IKBKEQ14164 716 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 DGKDQ16760 1214 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 C10orf120Q5SQS8 335 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 SCARA3Q6AZY7 606 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 PKN3Q6P5Z2 889 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 DHRS4L2Q6PKH6 230 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 IL27RAQ6UWB1 636 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 TMC8Q8IU68 726 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 RGL4Q8IZJ4 473 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 KIF2BQ8N4N8 673 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 LEMD2Q8NC56 503 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 NKX2-3Q8TAU0 364 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 ACTRT2Q8TDY3 377 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 TNFRSF14Q92956 283 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 TMEM80Q96HE8 168 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 MRPS26Q9BYN8 205 aaKnown RBP5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 ADAM19Q9H013 955 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 USP29Q9HBJ7 922 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 DDX4Q9NQI0 724 aaKnown RBP5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 ECHDC1Q9NTX5 307 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 TMEM260Q9NX78 707 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 CD274Q9NZQ7 290 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 MORF4L1Q9UBU8 362 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 RBM8AQ9Y5S9 174 aaKnown RBP5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 RNF103-CHMP3A0A140T963 221 aa5.97□□□□□ -1.45
TUBGCP4-207ENST00000563963 B4E171 279 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms