RNA–Protein interactions for RNA: ENST00000560097.1

AC104041.1-202, humanhuman

TSL 4 BASIC

Gene AC104041.1, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104041.1-202ENST00000560097 ARHGEF17Q96PE2 2063 aaPredicted RBP11.77□□□□□ -0.52
AC104041.1-202ENST00000560097 PMS2P1A4D2B8 440 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 TRABD2BA6NFA1 517 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 ZSCAN5CA6NGD5 496 aaPredicted RBP11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 A6NNZ2 444 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 RIOK3O14730 519 aaKnown RBP11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 TLX3O43711 291 aaPredicted RBP11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 MFSD11O43934 449 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 MAP3K6O95382 1288 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 IGSF6O95976 241 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 SERPING1P05155 500 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 NME1P15531 152 aaKnown RBP11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 HTR7P34969 479 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 EIF4A3P38919 411 aaKnown RBP11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 HCAR3P49019 387 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 INSM1Q01101 510 aaPredicted RBP11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 SLC10A2Q12908 348 aaPredicted RBP11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 SUZ12Q15022 739 aaKnown RBP11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 FILIP1LQ4L180 1135 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 RFLNAQ6ZTI6 216 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 VPS36Q86VN1 386 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 ZNF548Q8NEK5 533 aaPredicted RBP11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 ASB12Q8WXK4 309 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 HSPH1Q92598 858 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 LRIG1Q96JA1 1093 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 DNAJC7Q99615 494 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 CHP1Q99653 195 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 NUP85Q9BW27 656 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 ZWILCHQ9H900 591 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 DYRK4Q9NR20 520 aa11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 URB1O60287 2271 aaKnown RBP11.77□□□□□ -0.53
AC104041.1-202ENST00000560097 K7ESM1 405 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 DFFAO00273 331 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 SCAMP1O15126 338 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 TSPAN6O43657 245 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 PRPSAP2O60256 369 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 RFPL3O75679 317 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 CSF2P04141 144 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 CCDC172P0C7W6 258 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 C6P13671 934 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 ACP1P24666 158 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 CSNK1DP48730 415 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 GEMIN4P57678 1058 aaKnown RBP11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 MAXP61244 160 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 TRAF2Q12933 501 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 PDE1CQ14123 709 aaPredicted RBP11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 HES3Q5TGS1 186 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 NCBP2-AS2Q69YL0 99 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 ALKBH5Q6P6C2 394 aaKnown RBP11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 SRLQ86TD4 932 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 ZNF354CQ86Y25 554 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 CBARPQ8N350 705 aaPredicted RBP11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 PQLC3Q8N755 202 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 PCDH19Q8TAB3 1148 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 CASKIN2Q8WXE0 1202 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 RFFLQ8WZ73 363 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 RAB7BQ96AH8 199 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 FEM1CQ96JP0 617 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 APOLD1Q96LR9 279 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 LRRC61Q9BV99 259 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 SUV39H2Q9H5I1 410 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 IPO11Q9UI26 975 aaKnown RBP11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 ANAPC7Q9UJX3 599 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 HPCAL4Q9UM19 191 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 RAXQ9Y2V3 346 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 GPSM3Q9Y4H4 160 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 PCDHGA1Q9Y5H4 931 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 PTPRQQ9UMZ3 2332 aa11.76□□□□□ -0.53
AC104041.1-202ENST00000560097 IGSF10Q6WRI0 2623 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 CACNA1GO43497 2377 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 TMEM8BA6NDV4 472 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 C3orf70A6NLC5 250 aaPredicted RBP11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 YKT6O15498 198 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 HTRA2O43464 458 aaPredicted RBP11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 FUCA1P04066 466 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 MYBL1P10243 752 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 CKMT2P17540 419 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 LHCGRP22888 699 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 ARRB1P49407 418 aaPredicted RBP11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 PDX1P52945 283 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 IL10RBQ08334 325 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 CYP4F3Q08477 520 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 TBX2Q13207 712 aaPredicted RBP11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 ZNF211Q13398 564 aaPredicted RBP11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 C1orf61Q13536 156 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 DPYSL3Q14195 570 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 TCEA2Q15560 299 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 UGP2Q16851 508 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 SLC45A4Q5BKX6 768 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 PERM1Q5SV97 790 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 CDCP2Q5VXM1 449 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 GUSBP11Q6P575 273 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 LIPIQ6XZB0 460 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 TTC7BQ86TV6 843 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 PSTKQ8IV42 348 aaKnown RBP11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 OXR1Q8N573 874 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 DENND6BQ8NEG7 585 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 FAF2Q96CS3 445 aa11.75□□□□□ -0.53
AC104041.1-202ENST00000560097 OSBPL1AQ9BXW6 950 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms