RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 NPLOC4Q8TAT6 608 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 C9orf16Q9BUW7 83 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 ACAT2Q9BWD1 397 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 SEZ6LQ9BYH1 1024 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 UPF3AQ9H1J1 476 aaKnown RBP19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 RAVER2Q9HCJ3 691 aaKnown RBP19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 TOR4AQ9NXH8 423 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 B3GALNT1O75752 331 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 CCDC159P0C7I6 412 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 HTR1BP28222 390 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 SERPINB9P50453 376 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 BNIP2Q12982 314 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 ODR4Q5SWX8 454 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 AGAP9Q5VTM2 703 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 AGAP6Q5VW22 663 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 TXNRD3NBQ6F5E7 133 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 BRSK2Q8IWQ3 736 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 NT5C1BQ96P26 610 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 AGAP4Q96P64 663 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 FIZ1Q96SL8 496 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 IP6K2Q9UHH9 426 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 MYH9P35579 1960 aaKnown RBP19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 LINC00854A0A1B0GVQ3 168 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 PDZK1P1A8MUH7 402 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 TISP43B9A030 160 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 SHOXO15266 292 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 NDUFS2O75306 463 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 DBTP11182 482 aaKnown RBP19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 MAGP20916 626 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 YWHAZP63104 245 aaKnown RBP19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 TRAP1Q12931 704 aaKnown RBP19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 PPP1R3AQ16821 1122 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 SDE2Q6IQ49 451 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 LDHDQ86WU2 507 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 FBXL6Q8N531 539 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 CYP2W1Q8TAV3 490 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 VANGL2Q9ULK5 521 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 AURKCQ9UQB9 309 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 PCDHGA7Q9Y5G6 932 aa19.29■□□□□ 0.68
SEMA4B-215ENST00000560089 TANC1Q9C0D5 1861 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 SLC22A2O15244 555 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 EIF2DP41214 584 aaKnown RBP19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 MLLT6P55198 1093 aaPredicted RBP19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 MPP1Q00013 466 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 VGLL4Q14135 290 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 SUPT20HL1Q3ZLR7 823 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 OR7A2PQ8NGA2 310 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 SLC39A13Q96H72 371 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 METTL2AQ96IZ6 378 aaKnown RBP19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 DMRTB1Q96MA1 342 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 LRRC40Q9H9A6 602 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 POPDC2Q9HBU9 364 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 ZNF112Q9UJU3 913 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 DNMT3LQ9UJW3 386 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 FEM1BQ9UK73 627 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 HDAC3O15379 428 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 SNX2O60749 519 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 CFL1P23528 166 aaKnown RBP19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 PTPN7P35236 360 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 PRR16Q569H4 304 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 TMEM198Q66K66 360 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 LRRC8EQ6NSJ5 796 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 CNTD1Q8N815 330 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 PIK3C3Q8NEB9 887 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 FEZF2Q8TBJ5 459 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 DEPDC1BQ8WUY9 529 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 BTN2A3PQ96KV6 586 aa19.28■□□□□ 0.68
SEMA4B-215ENST00000560089 SEC24AO95486 1093 aa19.27■□□□□ 0.68
SEMA4B-215ENST00000560089 NDST3O95803 873 aa19.27■□□□□ 0.68
SEMA4B-215ENST00000560089 PRLP01236 227 aa19.27■□□□□ 0.68
SEMA4B-215ENST00000560089 ACOT2P49753 483 aa19.27■□□□□ 0.68
SEMA4B-215ENST00000560089 AP2S1P53680 142 aaPredicted RBP19.27■□□□□ 0.68
SEMA4B-215ENST00000560089 BACE1P56817 501 aa19.27■□□□□ 0.68
SEMA4B-215ENST00000560089 CTF1Q16619 201 aa19.27■□□□□ 0.68
SEMA4B-215ENST00000560089 TBCELQ5QJ74 424 aa19.27■□□□□ 0.68
SEMA4B-215ENST00000560089 CATSPEREQ5SY80 951 aa19.27■□□□□ 0.68
SEMA4B-215ENST00000560089 TMEM236Q5W0B7 351 aa19.27■□□□□ 0.68
SEMA4B-215ENST00000560089 TRAF7Q6Q0C0 670 aa19.27■□□□□ 0.68
SEMA4B-215ENST00000560089 TIFABQ6ZNK6 161 aa19.27■□□□□ 0.68
SEMA4B-215ENST00000560089 FAF2Q96CS3 445 aa19.27■□□□□ 0.68
SEMA4B-215ENST00000560089 A0A0G2JMP0 313 aa19.27■□□□□ 0.67
SEMA4B-215ENST00000560089 TRIM77I1YAP6 450 aa19.27■□□□□ 0.67
SEMA4B-215ENST00000560089 TBX1O43435 398 aa19.27■□□□□ 0.67
SEMA4B-215ENST00000560089 TPST1O60507 370 aa19.27■□□□□ 0.67
SEMA4B-215ENST00000560089 CST8O60676 142 aa19.27■□□□□ 0.67
SEMA4B-215ENST00000560089 GSTM2P28161 218 aa19.27■□□□□ 0.67
SEMA4B-215ENST00000560089 DSG3P32926 999 aa19.27■□□□□ 0.67
SEMA4B-215ENST00000560089 WDR78Q5VTH9 848 aa19.27■□□□□ 0.67
SEMA4B-215ENST00000560089 TRMT10BQ6PF06 316 aaKnown RBP19.27■□□□□ 0.67
SEMA4B-215ENST00000560089 ZBTB26Q9HCK0 441 aa19.27■□□□□ 0.67
SEMA4B-215ENST00000560089 SMPD3Q9NY59 655 aaPredicted RBP19.27■□□□□ 0.67
SEMA4B-215ENST00000560089 IL37Q9NZH6 218 aa19.27■□□□□ 0.67
SEMA4B-215ENST00000560089 SEPT10Q9P0V9 454 aa19.27■□□□□ 0.67
SEMA4B-215ENST00000560089 OAZ3Q9UMX2 235 aa19.27■□□□□ 0.67
SEMA4B-215ENST00000560089 TCAF2A6NFQ2 919 aa19.26■□□□□ 0.67
SEMA4B-215ENST00000560089 NFIBO00712 420 aa19.26■□□□□ 0.67
SEMA4B-215ENST00000560089 EI24O14681 340 aa19.26■□□□□ 0.67
SEMA4B-215ENST00000560089 CYBRD1Q53TN4 286 aa19.26■□□□□ 0.67
SEMA4B-215ENST00000560089 STEAP3Q658P3 488 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms