RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 TRAF2Q12933 501 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 UGP2Q16851 508 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 TMEM259Q4ZIN3 620 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 SLC45A4Q5BKX6 768 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 SLC23A3Q6PIS1 610 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 TTC7BQ86TV6 843 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 ZC3H18Q86VM9 953 aaKnown RBP16.98■□□□□ 0.31
RPL28-209ENST00000560055 HORMAD1Q86X24 394 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 GPR161Q8N6U8 529 aaKnown RBP16.98■□□□□ 0.31
RPL28-209ENST00000560055 CEP76Q8TAP6 659 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 SNX19Q92543 992 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 CARD9Q9H257 536 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 CAPN10Q9HC96 672 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 HAUS2Q9NVX0 235 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 SUSD2Q9UGT4 822 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 ZFR2Q9UPR6 939 aaKnown RBP16.98■□□□□ 0.31
RPL28-209ENST00000560055 PCDHGC4Q9Y5F7 938 aa16.98■□□□□ 0.31
RPL28-209ENST00000560055 A0A1W2PQU0 124 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 TSPAN6O43657 245 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 RNGTTO60942 597 aaKnown RBP16.97■□□□□ 0.31
RPL28-209ENST00000560055 MMP2P08253 660 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 PTPN3P26045 913 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 NUDT1P36639 197 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 DSC2Q02487 901 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 WASHC5Q12768 1159 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 DUOXA1Q1HG43 343 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 RSPO4Q2I0M5 234 aaPredicted RBP16.97■□□□□ 0.31
RPL28-209ENST00000560055 ZNF284Q2VY69 593 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 TEX44Q53QW1 395 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 LRRC73Q5JTD7 316 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 FAM182AQ5T1J6 154 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 CCDC181Q5TID7 509 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 TCEAL6Q6IPX3 200 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 KIAA1161Q6NSJ0 714 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 PRR23CQ6ZRP0 262 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 RABEPKQ7Z6M1 372 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 ZSCAN30Q86W11 494 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 ZCCHC9Q8N567 271 aaKnown RBP16.97■□□□□ 0.31
RPL28-209ENST00000560055 TCEAL3Q969E4 200 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 GGT7Q9UJ14 662 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 PYCARDQ9ULZ3 195 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 ITM2BQ9Y287 266 aa16.97■□□□□ 0.31
RPL28-209ENST00000560055 ANKRD36A6QL64 1941 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 KNL1Q8NG31 2342 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 A0A1B0GTW7 788 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 A0A1W2PQ67 120 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 TCRBV7S2A1N4TA0A589 114 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 BCAT2O15382 392 aaPredicted RBP16.96■□□□□ 0.31
RPL28-209ENST00000560055 MTSS1O43312 755 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 FZD6O60353 706 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 FOXD2O60548 495 aaPredicted RBP16.96■□□□□ 0.31
RPL28-209ENST00000560055 PCDH8O95206 1070 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 SERPINF2P08697 491 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 GNSP15586 552 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 ITIH2P19823 946 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 MMP12P39900 470 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 RPS21P63220 83 aaKnown RBP16.96■□□□□ 0.31
RPL28-209ENST00000560055 SF3A2Q15428 464 aaKnown RBP16.96■□□□□ 0.31
RPL28-209ENST00000560055 TRIM61Q5EBN2 209 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 SEL1L3Q68CR1 1132 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 HTR3CQ8WXA8 447 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 TADA1Q96BN2 335 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 TEKT5Q96M29 485 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 AGAP3Q96P47 875 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 CEP41Q9BYV8 373 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 MIR1-1HGQ9H1L0 117 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 TM9SF3Q9HD45 589 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 PCDH12Q9NPG4 1184 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 TRMT1Q9NXH9 659 aaKnown RBP16.96■□□□□ 0.31
RPL28-209ENST00000560055 TTLL3Q9Y4R7 772 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 RAI2Q9Y5P3 530 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 SPTBN2O15020 2390 aa16.96■□□□□ 0.31
RPL28-209ENST00000560055 TRPM6Q9BX84 2022 aa16.96■□□□□ 0.3
RPL28-209ENST00000560055 LNP1A1A4G5 178 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 USP27XA6NNY8 438 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 KCNK3O14649 394 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 RIOK3O14730 519 aaKnown RBP16.95■□□□□ 0.3
RPL28-209ENST00000560055 KHNYNO15037 678 aaKnown RBP16.95■□□□□ 0.3
RPL28-209ENST00000560055 NEBLO76041 1014 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 PGLSO95336 258 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 MAT2AP31153 395 aaKnown RBP16.95■□□□□ 0.3
RPL28-209ENST00000560055 EIF3EP60228 445 aaKnown RBP16.95■□□□□ 0.3
RPL28-209ENST00000560055 POLR2LP62875 67 aaKnown RBP16.95■□□□□ 0.3
RPL28-209ENST00000560055 RACK1P63244 317 aaKnown RBP16.95■□□□□ 0.3
RPL28-209ENST00000560055 IRX4P78413 519 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 ITKQ08881 620 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 ELP6Q0PNE2 266 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 FGL2Q14314 439 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 TMEM52BQ4KMG9 183 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 SETMARQ53H47 684 aaPredicted RBP16.95■□□□□ 0.3
RPL28-209ENST00000560055 CFAP58Q5T655 872 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 SEL1L2Q5TEA6 688 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 PRPF39Q86UA1 669 aaKnown RBP16.95■□□□□ 0.3
RPL28-209ENST00000560055 TTC13Q8NBP0 860 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 IMP4Q96G21 291 aaKnown RBP16.95■□□□□ 0.3
RPL28-209ENST00000560055 FEM1CQ96JP0 617 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 SLC6A18Q96N87 628 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 VAT1Q99536 393 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 TDRD1Q9BXT4 1180 aaKnown RBP16.95■□□□□ 0.3
RPL28-209ENST00000560055 SLC25A51Q9H1U9 297 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms