RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 ACVRL1P37023 503 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 SNRPD1P62314 119 aaKnown RBP10.9□□□□□ -0.66
TRAF3-207ENST00000559734 MEA1Q16626 185 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 C14orf28Q4W4Y0 310 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 EFHC2Q5JST6 749 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 ZNF658Q5TYW1 1059 aaPredicted RBP10.9□□□□□ -0.66
TRAF3-207ENST00000559734 KCTD16Q68DU8 428 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 GDPD4Q6W3E5 623 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 ZNF783Q6ZMS7 281 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 PIM3Q86V86 326 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 ZNF354CQ86Y25 554 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 EHBP1Q8NDI1 1231 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 GPR156Q8NFN8 814 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 OR2AP1Q8NGE2 309 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 ATL2Q8NHH9 583 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 CCDC34Q96HJ3 373 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 TBCBQ99426 244 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 APOOQ9BUR5 198 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 OSBPL1AQ9BXW6 950 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 ZYG11BQ9C0D3 744 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 ZMYND15Q9H091 742 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 DPEP2Q9H4A9 486 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 MOSPD1Q9UJG1 213 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 APPL1Q9UKG1 709 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 DAAM1Q9Y4D1 1078 aa10.9□□□□□ -0.66
TRAF3-207ENST00000559734 TMEM110-MUSTN1A8MSY1 372 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 ZNF891A8MT65 544 aaPredicted RBP10.89□□□□□ -0.67
TRAF3-207ENST00000559734 P4HA2O15460 535 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 RAD1O60671 282 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 ALDH4A1P30038 563 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 UGT1A3P35503 534 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 CXCR3P49682 368 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 PEX5P50542 639 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 OR1D5P58170 312 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 KRT85P78386 507 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 SLC6A3Q01959 620 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 BIRC2Q13490 618 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 INPP5AQ14642 412 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 ARHGAP44Q17R89 818 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 WSCD2Q2TBF2 565 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 GJB7Q6PEY0 223 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 CACNA2D3Q8IZS8 1091 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 WDTC1Q8N5D0 677 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 GPBAR1Q8TDU6 330 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 CCDC74BQ96LY2 380 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 WDR92Q96MX6 357 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 CATSPER2Q96P56 530 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 TAAR9Q96RI9 348 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 RBM15Q96T37 977 aaKnown RBP eCLIP10.89□□□□□ -0.67
TRAF3-207ENST00000559734 NPY6RQ99463 290 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 NUDT22Q9BRQ3 303 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 SUDS3Q9H7L9 328 aaPredicted RBP10.89□□□□□ -0.67
TRAF3-207ENST00000559734 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.89□□□□□ -0.67
TRAF3-207ENST00000559734 PLEKHB1Q9UF11 243 aaPredicted RBP10.89□□□□□ -0.67
TRAF3-207ENST00000559734 CNTN6Q9UQ52 1028 aa10.89□□□□□ -0.67
TRAF3-207ENST00000559734 IGLV3-10A0A075B6K4 115 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 FAM237AA0A1B0GTK4 181 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 RHPN2P1A8MT19 583 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 PSMA7O14818 248 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 PMM2O15305 246 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 NKX2-8O15522 239 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 DUX1O43812 170 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 AGFG2O95081 481 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 POP4O95707 220 aaKnown RBP10.88□□□□□ -0.67
TRAF3-207ENST00000559734 CPNE6O95741 557 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 CD160O95971 181 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 GSRP00390 522 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 PNLIPP16233 465 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 PPM1FP49593 454 aaPredicted RBP10.88□□□□□ -0.67
TRAF3-207ENST00000559734 MAZP56270 477 aaKnown RBP10.88□□□□□ -0.67
TRAF3-207ENST00000559734 GEMIN4P57678 1058 aaKnown RBP10.88□□□□□ -0.67
TRAF3-207ENST00000559734 MYLK3Q32MK0 819 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 PTPN20Q4JDL3 420 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 LACTB2Q53H82 288 aaPredicted RBP10.88□□□□□ -0.67
TRAF3-207ENST00000559734 SPECC1LQ69YQ0 1117 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 ISM2Q6H9L7 571 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 RWDD4Q6NW29 188 aaKnown RBP10.88□□□□□ -0.67
TRAF3-207ENST00000559734 SLC26A9Q7LBE3 791 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 NRSN1Q8IZ57 195 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 NETO2Q8NC67 525 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 CCDC112Q8NEF3 446 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 OR1E3Q8WZA6 343 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 ARHGEF2Q92974 986 aaKnown RBP10.88□□□□□ -0.67
TRAF3-207ENST00000559734 ART4Q93070 314 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 MIB2Q96AX9 1013 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 ISG20Q96AZ6 181 aaKnown RBP10.88□□□□□ -0.67
TRAF3-207ENST00000559734 CEP63Q96MT8 703 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 GDAP1L1Q96MZ0 367 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 NCAPGQ9BPX3 1015 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 MRPL40Q9NQ50 206 aaKnown RBP10.88□□□□□ -0.67
TRAF3-207ENST00000559734 PLCB1Q9NQ66 1216 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 RRN3Q9NYV6 651 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 DNAI1Q9UI46 699 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 HPCAL4Q9UM19 191 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 ZDHHC9Q9Y397 364 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 B3GALT1Q9Y5Z6 326 aa10.88□□□□□ -0.67
TRAF3-207ENST00000559734 IGHV5-10-1A0A0J9YXX1 117 aa10.87□□□□□ -0.67
TRAF3-207ENST00000559734 PRR19A6NJB7 356 aa10.87□□□□□ -0.67
TRAF3-207ENST00000559734 B4GAT1O43505 415 aa10.87□□□□□ -0.67
TRAF3-207ENST00000559734 NUDT21O43809 227 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms