RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 PEX3P56589 373 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 LILRA4P59901 499 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 RPL10AP62906 217 aaKnown RBP6.3□□□□□ -1.4
CRNDE-207ENST00000559598 TSPY1Q01534 308 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 DUSP2Q05923 314 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 MCL1Q07820 350 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 RESTQ13127 1097 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 TOB2Q14106 344 aaPredicted RBP6.3□□□□□ -1.4
CRNDE-207ENST00000559598 DHX8Q14562 1220 aaKnown RBP6.3□□□□□ -1.4
CRNDE-207ENST00000559598 ZBTB6Q15916 424 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 MUM1Q2TAK8 710 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 TOR2AQ5JU69 321 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 SPATA1Q5VX52 437 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 RUFY3Q7L099 469 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 KCNK18Q7Z418 384 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 ZNF843Q8N446 348 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 CCDC33Q8N5R6 958 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 ALLCQ8N6M5 410 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 CNTD1Q8N815 330 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 PNPLA1Q8N8W4 532 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 TSPEARQ8WU66 669 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 CEP295NLQ96MC4 621 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 CAMK1GQ96NX5 476 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 PNKPQ96T60 521 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 CCSER1Q9C0I3 900 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 ENKD1Q9H0I2 346 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 BHMT2Q9H2M3 363 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 TSPY26PQ9H489 355 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 PRORYQ9H606 182 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 CLMPQ9H6B4 373 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 TRPC7Q9HCX4 862 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 KMT5AQ9NQR1 393 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 GEMIN8Q9NWZ8 242 aaKnown RBP6.3□□□□□ -1.4
CRNDE-207ENST00000559598 CWC15Q9P013 229 aaKnown RBP6.3□□□□□ -1.4
CRNDE-207ENST00000559598 DERAQ9Y315 318 aa6.3□□□□□ -1.4
CRNDE-207ENST00000559598 COL5A1P20908 1838 aaPredicted RBP6.29□□□□□ -1.4
CRNDE-207ENST00000559598 MYLKQ15746 1914 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 IGHV1OR15-9A0A0B4J2B8 117 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 A0A1B0GTW7 788 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 TRABD2BA6NFA1 517 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 MATN3O15232 486 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 NDUFS2O75306 463 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 ADRB2P07550 413 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 CTSSP25774 331 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 ACRV1P26436 265 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 HNF1BP35680 557 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 CASRP41180 1078 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 TAF6P49848 677 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 CDKN1CP49918 316 aaPredicted RBP6.29□□□□□ -1.4
CRNDE-207ENST00000559598 SRSF2Q01130 221 aaKnown RBP6.29□□□□□ -1.4
CRNDE-207ENST00000559598 GRIK2Q13002 908 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 GPS2Q13227 327 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 KLF1Q13351 362 aaPredicted RBP6.29□□□□□ -1.4
CRNDE-207ENST00000559598 ELAVL1Q15717 326 aaKnown RBP6.29□□□□□ -1.4
CRNDE-207ENST00000559598 SMAD1Q15797 465 aaKnown RBP6.29□□□□□ -1.4
CRNDE-207ENST00000559598 C19orf54Q5BKX5 351 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 EARS2Q5JPH6 523 aaKnown RBP6.29□□□□□ -1.4
CRNDE-207ENST00000559598 SPRED1Q7Z699 444 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 KRT222Q8N1A0 295 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 TRIML1Q8N9V2 468 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 OR5M3Q8NGP4 307 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 OR2I1PQ8NGU4 316 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 SETD7Q8WTS6 366 aaKnown RBP6.29□□□□□ -1.4
CRNDE-207ENST00000559598 SNX33Q8WV41 574 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 ANKRD7Q92527 254 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 TMEM131Q92545 1883 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 MIEF2Q96C03 454 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 WBP1Q96G27 269 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 ZNF419Q96HQ0 510 aaPredicted RBP6.29□□□□□ -1.4
CRNDE-207ENST00000559598 NTPCRQ9BSD7 190 aaKnown RBP6.29□□□□□ -1.4
CRNDE-207ENST00000559598 MENTQ9BUN1 341 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 FSCN3Q9NQT6 498 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 CCM2LQ9NUG4 571 aaPredicted RBP6.29□□□□□ -1.4
CRNDE-207ENST00000559598 DNAJC28Q9NX36 388 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 EHD2Q9NZN4 543 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 GCNT4Q9P109 453 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 HECAQ9UBI9 543 aaPredicted RBP6.29□□□□□ -1.4
CRNDE-207ENST00000559598 USP25Q9UHP3 1055 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 MAGED2Q9UNF1 606 aaPredicted RBP6.29□□□□□ -1.4
CRNDE-207ENST00000559598 CYP46A1Q9Y6A2 500 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 MORC2Q9Y6X9 1032 aaPredicted RBP6.29□□□□□ -1.4
CRNDE-207ENST00000559598 ATMQ13315 3056 aa6.29□□□□□ -1.4
CRNDE-207ENST00000559598 A0A087WWV3 80 aa6.28□□□□□ -1.4
CRNDE-207ENST00000559598 ANO9A1A5B4 782 aa6.28□□□□□ -1.4
CRNDE-207ENST00000559598 PIRO00625 290 aa6.28□□□□□ -1.4
CRNDE-207ENST00000559598 CTIFO43310 598 aaKnown RBP6.28□□□□□ -1.4
CRNDE-207ENST00000559598 EPB41L2O43491 1005 aaKnown RBP6.28□□□□□ -1.4
CRNDE-207ENST00000559598 OR52Z1P0C646 297 aa6.28□□□□□ -1.4
CRNDE-207ENST00000559598 CDK4P11802 303 aa6.28□□□□□ -1.4
CRNDE-207ENST00000559598 HOXB2P14652 356 aa6.28□□□□□ -1.4
CRNDE-207ENST00000559598 GYPEP15421 78 aa6.28□□□□□ -1.4
CRNDE-207ENST00000559598 GABRG2P18507 467 aa6.28□□□□□ -1.4
CRNDE-207ENST00000559598 CALRP27797 417 aaKnown RBP6.28□□□□□ -1.4
CRNDE-207ENST00000559598 ABCD1P33897 745 aa6.28□□□□□ -1.4
CRNDE-207ENST00000559598 MATKP42679 507 aa6.28□□□□□ -1.4
CRNDE-207ENST00000559598 MATR3P43243 847 aaKnown RBP eCLIP6.28□□□□□ -1.4
CRNDE-207ENST00000559598 PPP3CCP48454 512 aa6.28□□□□□ -1.4
CRNDE-207ENST00000559598 CFHR1Q03591 330 aa6.28□□□□□ -1.4
CRNDE-207ENST00000559598 INAVAQ3KP66 663 aa6.28□□□□□ -1.4
CRNDE-207ENST00000559598 CFAP221Q4G0U5 840 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms