RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 PCDHGC4Q9Y5F7 938 aa14.94□□□□□ -0.02
SNRPA1-207ENST00000559309 RAI2Q9Y5P3 530 aa14.94□□□□□ -0.02
SNRPA1-207ENST00000559309 MYO15AQ9UKN7 3530 aa14.94□□□□□ -0.02
SNRPA1-207ENST00000559309 CTAGE15A4D2H0 777 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 C16orf96A6NNT2 1141 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 C1QTNF3-AMACRE9PGA6 284 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 AREL1O15033 823 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 MID1O15344 667 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 APBB3O95704 486 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 UGT2B4P06133 528 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 CTAGE8P0CG41 777 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 TPSB2P20231 275 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 SLC8A1P32418 973 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 SUOXP51687 545 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 DRG2P55039 364 aaKnown RBP14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 GEMP55040 296 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 TAS2R38P59533 333 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 TPSAB1Q15661 275 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 KCTD19Q17RG1 926 aaPredicted RBP14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 FAM46CQ5VWP2 391 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 DUPD1Q68J44 220 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 CTAGE6Q86UF2 777 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 CTAGE4Q8IX94 777 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 CBARPQ8N350 705 aaPredicted RBP14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 TSTD1Q8NFU3 115 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 GRIN3AQ8TCU5 1115 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 CCHCR1Q8TD31 782 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 CPT1BQ92523 772 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 SIPA1Q96FS4 1042 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 KLHL32Q96NJ5 620 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 CARD6Q9BX69 1037 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 IRF2BPLQ9H1B7 796 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 SERGEFQ9UGK8 458 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 FZD4Q9ULV1 537 aa14.93□□□□□ -0.02
SNRPA1-207ENST00000559309 FANCMQ8IYD8 2048 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 SLC7A4O43246 635 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 AP1G1O43747 822 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 RNASEH1O60930 286 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 IL1BP01584 269 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 TIMP2P16035 220 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 WNT3AP56704 352 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 CDK16Q00536 496 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 CDK18Q07002 472 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 ITKQ08881 620 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 CNTN1Q12860 1018 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 CDKN3Q16667 212 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 UGP2Q16851 508 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 MAP7D1Q3KQU3 841 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 ZNF528Q3MIS6 628 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 GLE1Q53GS7 698 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 ZNF534Q76KX8 674 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 GSTA5Q7RTV2 222 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 MAATS1Q7Z4T9 603 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 NAT8LQ8N9F0 302 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 LRRN4CLQ8ND94 238 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 PRCCQ92733 491 aaPredicted RBP14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 HHIPQ96QV1 700 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 ERP44Q9BS26 406 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 RAB6BQ9NRW1 208 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 VPS13AQ96RL7 3174 aa14.92□□□□□ -0.02
SNRPA1-207ENST00000559309 SCN8AQ9UQD0 1980 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 A0A0J9YYE9 177 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 DNALI1O14645 258 aaPredicted RBP14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 PSMD3O43242 534 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 BNIP3LO60238 219 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 NEBLO76041 1014 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 ALDH1A2O94788 518 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 TRBC1P01850 177 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 P2RY2P41231 377 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 ABL2P42684 1182 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 MAGEA3P43357 314 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 PSMD8P48556 350 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 TPMTP51580 245 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 TRIP13Q15645 432 aaPredicted RBP14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 SLC1A5Q15758 541 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 RNASEH2BQ5TBB1 312 aaKnown RBP14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 FAXCQ5TGI0 409 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 ERN2Q76MJ5 926 aaKnown RBP14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 KBTBD6Q86V97 674 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 PDCD7Q8N8D1 485 aaKnown RBP14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 RAB7BQ96AH8 199 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 SCRN2Q96FV2 425 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 PPP1R16AQ96I34 528 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 TRIM51Q9BSJ1 452 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 LRRC1Q9BTT6 524 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 LRRC40Q9H9A6 602 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 CD93Q9NPY3 652 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 SPATA6Q9NWH7 488 aaPredicted RBP14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 GRHL1Q9NZI5 618 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 PHTF1Q9UMS5 762 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 TTLL3Q9Y4R7 772 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 PCDHB9Q9Y5E1 797 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 DMDP11532 3685 aa14.91□□□□□ -0.02
SNRPA1-207ENST00000559309 MYLKQ15746 1914 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 TCRBV7S3A2A0A539 114 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 UPK3BL1B0FP48 263 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 ANKRD66B4E2M5 251 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 UPK3BL2E5RIL1 263 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 KPNA3O00505 521 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 RIOK3O14730 519 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms