RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 OSBPL1AQ9BXW6 950 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 CPEB1Q9BZB8 566 aaKnown RBP12.54□□□□□ -0.4
GABPB1-208ENST00000558970 NEUROG2Q9H2A3 272 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 AMACRQ9UHK6 382 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 FBXO4Q9UKT5 387 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 DRG1Q9Y295 367 aaKnown RBP12.54□□□□□ -0.4
GABPB1-208ENST00000558970 NCKAP1Q9Y2A7 1128 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 MRFAP1Q9Y605 127 aa12.54□□□□□ -0.4
GABPB1-208ENST00000558970 TP53BP1Q12888 1972 aaPredicted RBP12.53□□□□□ -0.4
GABPB1-208ENST00000558970 A0A0U1RQS6 177 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 MAP3K13O43283 966 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 ZNF500O60304 480 aaPredicted RBP12.53□□□□□ -0.4
GABPB1-208ENST00000558970 OPHN1O60890 802 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 USP12O75317 370 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 GCATO75600 419 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 ECEL1O95672 775 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 KRT14P02533 472 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 SLC4A1P02730 911 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 ADRB3P13945 408 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 BCKDHBP21953 392 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 STIP1P31948 543 aaKnown RBP12.53□□□□□ -0.4
GABPB1-208ENST00000558970 RPL22P35268 128 aaKnown RBP12.53□□□□□ -0.4
GABPB1-208ENST00000558970 ABL2P42684 1182 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 MAPK8P45983 427 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 LMAN1P49257 510 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 NEK3P51956 506 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 EPHB1P54762 984 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 FAM193AP78312 1265 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 BASP1P80723 227 aaKnown RBP12.53□□□□□ -0.4
GABPB1-208ENST00000558970 CKAP4Q07065 602 aaKnown RBP12.53□□□□□ -0.4
GABPB1-208ENST00000558970 PRPSAP1Q14558 356 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 GRM3Q14832 879 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 PPP1R7Q15435 360 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 P3H1Q32P28 736 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 USP39Q53GS9 565 aaKnown RBP12.53□□□□□ -0.4
GABPB1-208ENST00000558970 ARMC12Q5T9G4 340 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 AGBL4Q5VU57 503 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 ALG1LQ6GMV1 187 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 MAMSTRQ6ZN01 415 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 ARMCX6Q7L4S7 300 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 LONP2Q86WA8 852 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 SPATA4Q8NEY3 305 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 RMDN1Q96DB5 314 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 IFT43Q96FT9 208 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 TOE1Q96GM8 510 aaKnown RBP12.53□□□□□ -0.4
GABPB1-208ENST00000558970 SPACA7Q96KW9 195 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 TRIM51Q9BSJ1 452 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 FICDQ9BVA6 458 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 GPR174Q9BXC1 333 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 FSD1LQ9BXM9 530 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 TDRD1Q9BXT4 1180 aaKnown RBP12.53□□□□□ -0.4
GABPB1-208ENST00000558970 PCDH9Q9HC56 1237 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 RAB6BQ9NRW1 208 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 PIH1D1Q9NWS0 290 aaKnown RBP12.53□□□□□ -0.4
GABPB1-208ENST00000558970 RNF14Q9UBS8 474 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 FAM153AQ9UHL3 310 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 R4GN57 208 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 FANCMQ8IYD8 2048 aa12.53□□□□□ -0.4
GABPB1-208ENST00000558970 TNRC6BQ9UPQ9 1833 aaKnown RBP12.53□□□□□ -0.4
GABPB1-208ENST00000558970 SCN8AQ9UQD0 1980 aa12.52□□□□□ -0.4
GABPB1-208ENST00000558970 GVINP1Q7Z2Y8 2422 aa12.52□□□□□ -0.4
GABPB1-208ENST00000558970 TBC1D3DA0A087WVF3 549 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 TBC1D3IA0A087WXS9 549 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 TBC1D3EA0A087X179 549 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 TBC1D3KA0A087X1G2 549 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 IGHV1OR15-9A0A0B4J2B8 117 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 TBC1D3FA6NER0 549 aaPredicted RBP12.52□□□□□ -0.41
GABPB1-208ENST00000558970 TBC1D3LB9A6J9 549 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 E7EVH7 732 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 CCDC188H7C350 402 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 NEMP1O14524 444 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 TRAFD1O14545 582 aaPredicted RBP12.52□□□□□ -0.41
GABPB1-208ENST00000558970 TTI1O43156 1089 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 NDUFS2O75306 463 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 RPP40O75818 363 aaKnown RBP12.52□□□□□ -0.41
GABPB1-208ENST00000558970 PCDH8O95206 1070 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 PGLSO95336 258 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 GAS8O95995 478 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 ALPIP09923 528 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 TBC1D3HP0C7X1 549 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 PIRTP0C851 137 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 CES1P23141 567 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 MAT2AP31153 395 aaKnown RBP12.52□□□□□ -0.41
GABPB1-208ENST00000558970 CHRNA4P43681 627 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 TNNT3P45378 269 aaPredicted RBP12.52□□□□□ -0.41
GABPB1-208ENST00000558970 FNTAP49354 379 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 ADPRHP54922 357 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 GEMP55040 296 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 WNT3AP56704 352 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 DR1Q01658 176 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 RPL6Q02878 288 aaKnown RBP12.52□□□□□ -0.41
GABPB1-208ENST00000558970 GPS1Q13098 491 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 LPAL2Q16609 132 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 WHAMMP3Q1A5X7 153 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 MAP7D1Q3KQU3 841 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 PIP5KL1Q5T9C9 394 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 DENND2CQ68D51 928 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 TBC1D3GQ6DHY5 549 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 TBC1D3CQ6IPX1 549 aa12.52□□□□□ -0.41
GABPB1-208ENST00000558970 PRR23BQ6ZRT6 265 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms