RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 FBRSQ9HAH7 460 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 SAMD15Q9P1V8 674 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 PCSK1NQ9UHG2 260 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 ANAPC5Q9UJX4 755 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 EFR3BQ9Y2G0 817 aa10.47□□□□□ -0.73
TPM1-212ENST00000558347 CNOT1A5YKK6 2376 aaKnown RBP10.47□□□□□ -0.73
TPM1-212ENST00000558347 C3orf70A6NLC5 250 aaPredicted RBP10.46□□□□□ -0.74
TPM1-212ENST00000558347 MEI4A8MW99 385 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 ZNF487B1APH4 448 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 GIPC1O14908 333 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 CNTN5O94779 1100 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 DNTTP04053 509 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 SRPRAP08240 638 aaKnown RBP10.46□□□□□ -0.74
TPM1-212ENST00000558347 KDELR1P24390 212 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 ITGA8P53708 1063 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 DEUP1Q05D60 604 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 XRCC4Q13426 336 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 SLC12A1Q13621 1099 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 STAT4Q14765 748 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 PDK2Q15119 407 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 C5orf22Q49AR2 442 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 WDR45BQ5MNZ6 344 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 BRMS1LQ5PSV4 323 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 ARTNQ5T4W7 220 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 C9orf64Q5T6V5 341 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 ZNF776Q68DI1 518 aaPredicted RBP10.46□□□□□ -0.74
TPM1-212ENST00000558347 PSAPL1Q6NUJ1 521 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 SCYL2Q6P3W7 929 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 SPOCD1Q6ZMY3 1216 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 RABEPKQ7Z6M1 372 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 EXOC3L1Q86VI1 746 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 ZNF683Q8IZ20 524 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 ZCCHC9Q8N567 271 aaKnown RBP10.46□□□□□ -0.74
TPM1-212ENST00000558347 OR2I1PQ8NGU4 316 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 MAGEC3Q8TD91 643 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 PTPRN2Q92932 1015 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 ALG14Q96F25 216 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 GTPBP2Q9BX10 602 aaKnown RBP10.46□□□□□ -0.74
TPM1-212ENST00000558347 OSBPL8Q9BZF1 889 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 PPCSQ9HAB8 311 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 SLC40A1Q9NP59 571 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 SLCO1B1Q9Y6L6 691 aa10.46□□□□□ -0.74
TPM1-212ENST00000558347 ASCC3Q8N3C0 2202 aaKnown RBP10.45□□□□□ -0.74
TPM1-212ENST00000558347 ASPMQ8IZT6 3477 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 LRRD1A4D1F6 860 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 ARHGAP33O14559 1287 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 MID1O15344 667 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 VAV1P15498 845 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 GJC1P36383 396 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 CDKN2BP42772 138 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 SCTRP47872 440 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 NOVA1P51513 510 aaKnown RBP10.45□□□□□ -0.74
TPM1-212ENST00000558347 PLK1P53350 603 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 ZBTB16Q05516 673 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 SCAPQ12770 1279 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 DPYSL2Q16555 572 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 ALFQ53S48 1182 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 KCNT1Q5JUK3 1230 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 RNF219Q5W0B1 726 aaPredicted RBP10.45□□□□□ -0.74
TPM1-212ENST00000558347 MFSD7Q6UXD7 560 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 CCDC25Q86WR0 208 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 MAP7D3Q8IWC1 876 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 LRRC34Q8IZ02 419 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 MINDY1Q8N5J2 469 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 C1orf216Q8TAB5 229 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 TTC25Q96NG3 672 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 FAM129BQ96TA1 746 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 SNRNP25Q9BV90 132 aaKnown RBP10.45□□□□□ -0.74
TPM1-212ENST00000558347 MIR1-1HGQ9H1L0 117 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 KLC4Q9NSK0 619 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 NINJ2Q9NZG7 142 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 SERGEFQ9UGK8 458 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 SUSD2Q9UGT4 822 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 FZD10Q9ULW2 581 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 WDFY3Q8IZQ1 3526 aa10.45□□□□□ -0.74
TPM1-212ENST00000558347 hCG_1818297A0A087WSY0 165 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.44□□□□□ -0.74
TPM1-212ENST00000558347 EDDM13A0A1B0GTR0 161 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 A0A1B0GTW7 788 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 CFAP73A6NFT4 308 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 SMIM23A6NLE4 172 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 CHUKO15111 745 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 CDH16O75309 829 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 CLDN11O75508 207 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 SEMA4FO95754 770 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 GNSP15586 552 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 ADRA1BP35368 520 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 ADCY8P40145 1251 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 GTF2A1P52655 376 aaPredicted RBP10.44□□□□□ -0.74
TPM1-212ENST00000558347 ATXN3P54252 364 aaPredicted RBP10.44□□□□□ -0.74
TPM1-212ENST00000558347 CDH4P55283 916 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 MTA1Q13330 715 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 ZNF177Q13360 481 aaPredicted RBP10.44□□□□□ -0.74
TPM1-212ENST00000558347 SNX1Q13596 522 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 CST6Q15828 149 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 SMTNL2Q2TAL5 461 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 TFDP3Q5H9I0 405 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 HIBCHQ6NVY1 386 aaPredicted RBP10.44□□□□□ -0.74
TPM1-212ENST00000558347 FAM131BQ86XD5 332 aa10.44□□□□□ -0.74
TPM1-212ENST00000558347 TDRPQ86YL5 185 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms