RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 RPL22P35268 128 aaKnown RBP21.44■■□□□ 1.02
CASC4-204ENST00000557945 GEMP55040 296 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 LRRC73Q5JTD7 316 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 ZSWIM9Q86XI8 627 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 FRMD1Q8N878 549 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 IPMKQ8NFU5 416 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 OR14C36Q8NHC7 312 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 TADA1Q96BN2 335 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 ECHDC3Q96DC8 303 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 IFT43Q96FT9 208 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 OXNAD1Q96HP4 312 aaPredicted RBP21.44■■□□□ 1.02
CASC4-204ENST00000557945 PPP1R2P1Q96PQ5 205 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 PRRX2Q99811 253 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 BTBD1Q9H0C5 482 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 PCDH9Q9HC56 1237 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 AAR2Q9Y312 384 aaKnown RBP21.44■■□□□ 1.02
CASC4-204ENST00000557945 MRFAP1Q9Y605 127 aa21.44■■□□□ 1.02
CASC4-204ENST00000557945 A0A1W2PQ67 120 aa21.43■■□□□ 1.02
CASC4-204ENST00000557945 TSPAN11A1L157 253 aa21.43■■□□□ 1.02
CASC4-204ENST00000557945 ECEL1O95672 775 aa21.43■■□□□ 1.02
CASC4-204ENST00000557945 GAS8O95995 478 aa21.43■■□□□ 1.02
CASC4-204ENST00000557945 IGLV3-19P01714 112 aa21.43■■□□□ 1.02
CASC4-204ENST00000557945 KRT14P02533 472 aa21.43■■□□□ 1.02
CASC4-204ENST00000557945 CD6P30203 668 aa21.43■■□□□ 1.02
CASC4-204ENST00000557945 TNNT3P45378 269 aaPredicted RBP21.43■■□□□ 1.02
CASC4-204ENST00000557945 VPS41P49754 854 aa21.43■■□□□ 1.02
CASC4-204ENST00000557945 EPHB1P54762 984 aa21.43■■□□□ 1.02
CASC4-204ENST00000557945 WNT3AP56704 352 aa21.43■■□□□ 1.02
CASC4-204ENST00000557945 POLR2LP62875 67 aaKnown RBP21.43■■□□□ 1.02
CASC4-204ENST00000557945 C2orf54Q08AI8 447 aa21.43■■□□□ 1.02
CASC4-204ENST00000557945 PIP5KL1Q5T9C9 394 aa21.43■■□□□ 1.02
CASC4-204ENST00000557945 AGBL4Q5VU57 503 aa21.43■■□□□ 1.02
CASC4-204ENST00000557945 TOE1Q96GM8 510 aaKnown RBP21.43■■□□□ 1.02
CASC4-204ENST00000557945 RUNDC3BQ96NL0 473 aa21.43■■□□□ 1.02
CASC4-204ENST00000557945 KRT12Q99456 494 aa21.43■■□□□ 1.02
CASC4-204ENST00000557945 VPS45Q9NRW7 570 aa21.43■■□□□ 1.02
CASC4-204ENST00000557945 GOLGA6CA6NDK9 693 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 GOLGA6BA6NDN3 693 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 FAM47DPA6NHR8 397 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 UPK3BL1B0FP48 263 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 UPK3BL2E5RIL1 263 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 H0Y858 1186 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 SLC7A4O43246 635 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 MAP3K13O43283 966 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 NDUFS2O75306 463 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 RPP40O75818 363 aaKnown RBP21.42■■□□□ 1.02
CASC4-204ENST00000557945 PRKCGP05129 697 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 PDHA1P08559 390 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 GOLGA6DP0CG33 693 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 SRSF5Q13243 272 aaKnown RBP21.42■■□□□ 1.02
CASC4-204ENST00000557945 MPP3Q13368 585 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 PPP1R7Q15435 360 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 SLC14A2Q15849 920 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 UGP2Q16851 508 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 KDELC1Q6UW63 502 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 C4orf22Q6V702 233 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 LPCAT1Q8NF37 534 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 NELL1Q92832 810 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 GORASP1Q9BQQ3 440 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 MLPHQ9BV36 600 aaPredicted RBP21.42■■□□□ 1.02
CASC4-204ENST00000557945 FSD1LQ9BXM9 530 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 ADGRE3Q9BY15 652 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 SGK2Q9HBY8 427 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 RAB6BQ9NRW1 208 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 GOLGA6AQ9NYA3 693 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 PCYOX1Q9UHG3 505 aa21.42■■□□□ 1.02
CASC4-204ENST00000557945 PRR23AA6NEV1 266 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 NEMP1O14524 444 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 ACSL1P33121 698 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 FDFT1P37268 417 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 ABL2P42684 1182 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 LMAN1P49257 510 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 ADPRHP54922 357 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 CDK18Q07002 472 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 CCDC70Q6NSX1 233 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 ERAP2Q6P179 960 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 GAB3Q8WWW8 586 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 RAB7BQ96AH8 199 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 ETNK1Q9HBU6 452 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 PCDH12Q9NPG4 1184 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 WSB2Q9NYS7 404 aaPredicted RBP21.41■■□□□ 1.02
CASC4-204ENST00000557945 PHTF1Q9UMS5 762 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 ARIH1Q9Y4X5 557 aaPredicted RBP21.41■■□□□ 1.02
CASC4-204ENST00000557945 PCDHGA2Q9Y5H1 932 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 ANKRD36A6QL64 1941 aa21.41■■□□□ 1.02
CASC4-204ENST00000557945 E7EVH7 732 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 FZD6O60353 706 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 SEMA4FO95754 770 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 PRLP01236 227 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 ITIH2P19823 946 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 FAM193AP78312 1265 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 BASP1P80723 227 aaKnown RBP21.4■■□□□ 1.02
CASC4-204ENST00000557945 DR1Q01658 176 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 GPS1Q13098 491 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 GALNT3Q14435 633 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 SYCP2LQ5T4T6 812 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 SLC36A4Q6YBV0 504 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 ZNF572Q7Z3I7 529 aaPredicted RBP21.4■■□□□ 1.02
CASC4-204ENST00000557945 NDUFAF2Q8N183 169 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 PRSS33Q8NF86 280 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms