RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 GLMNQ92990 594 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 CRELD1Q96HD1 420 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 TUBGCP5Q96RT8 1024 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 BPIFA3Q9BQP9 254 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 SNRNP25Q9BV90 132 aaKnown RBP14.78□□□□□ -0.04
SHMT2-235ENST00000557740 PDFQ9HBH1 243 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 PCDH12Q9NPG4 1184 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 MBNL1Q9NR56 388 aaKnown RBP14.78□□□□□ -0.04
SHMT2-235ENST00000557740 PCSK1NQ9UHG2 260 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 FASNP49327 2511 aaKnown RBP14.78□□□□□ -0.04
SHMT2-235ENST00000557740 CELSR3Q9NYQ7 3312 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 LAMA5O15230 3695 aa14.77□□□□□ -0.04
SHMT2-235ENST00000557740 NBEAQ8NFP9 2946 aa14.77□□□□□ -0.04
SHMT2-235ENST00000557740 IGSF10Q6WRI0 2623 aa14.77□□□□□ -0.04
SHMT2-235ENST00000557740 TSPAN11A1L157 253 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 EIF4E1BA6NMX2 242 aaKnown RBP14.77□□□□□ -0.05
SHMT2-235ENST00000557740 J3KR12 359 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 DFFAO00273 331 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 TPP1O14773 563 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 USP12O75317 370 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 PALMO75781 387 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 ITIH2P19823 946 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 ITPKBP27987 946 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 EIF4A3P38919 411 aaKnown RBP14.77□□□□□ -0.05
SHMT2-235ENST00000557740 RPIAP49247 311 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 PAPOLAP51003 745 aaKnown RBP14.77□□□□□ -0.05
SHMT2-235ENST00000557740 PPARDQ03181 441 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 KLHL30Q0D2K2 578 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 LRRC14Q15048 493 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 CA9Q16790 459 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 UGP2Q16851 508 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 SOWAHCQ53LP3 525 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-235ENST00000557740 PPP6R3Q5H9R7 873 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-235ENST00000557740 ERMARDQ5T6L9 678 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 GUSBP11Q6P575 273 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 EFL1Q7Z2Z2 1120 aaKnown RBP14.77□□□□□ -0.05
SHMT2-235ENST00000557740 ZNF653Q96CK0 615 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 TRIM11Q96F44 468 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 TBATAQ96M53 351 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 ZNF641Q96N77 438 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-235ENST00000557740 KCTD15Q96SI1 283 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-235ENST00000557740 LRRC61Q9BV99 259 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 CINPQ9BW66 212 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-235ENST00000557740 TCEAL2Q9H3H9 227 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-235ENST00000557740 SUV39H2Q9H5I1 410 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 HAUS4Q9H6D7 363 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 ATP13A3Q9H7F0 1226 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 SP110Q9HB58 689 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 TMEM63CQ9P1W3 806 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 SALL4Q9UJQ4 1053 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 COQ6Q9Y2Z9 468 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 SCINQ9Y6U3 715 aa14.77□□□□□ -0.05
SHMT2-235ENST00000557740 A0A1W2PQC6 194 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 TMEM191CA6NGB0 347 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 TMEM110-MUSTN1A8MSY1 372 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 LMO7DNF2Z398 122 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 MUSKO15146 869 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 GCATO75600 419 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 MPOP05164 745 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 C6P13671 934 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 SERPINA4P29622 427 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 MMP12P39900 470 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 BLKP51451 505 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 ADKP55263 362 aaKnown RBP14.76□□□□□ -0.05
SHMT2-235ENST00000557740 GABREP78334 506 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 C1orf61Q13536 156 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 ACAP1Q15027 740 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 C6orf132Q5T0Z8 1188 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 ZNF571Q7Z3V5 609 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-235ENST00000557740 FSTL5Q8N475 847 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-235ENST00000557740 TPCN2Q8NHX9 752 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 FNIP1Q8TF40 1166 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 NAT6Q93015 286 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 PEBP4Q96S96 227 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 SLC39A8Q9C0K1 460 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 CNOT8Q9UFF9 292 aaKnown RBP14.76□□□□□ -0.05
SHMT2-235ENST00000557740 DOLKQ9UPQ8 538 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 ATP8A1Q9Y2Q0 1164 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 ASXL3Q9C0F0 2248 aa14.76□□□□□ -0.05
SHMT2-235ENST00000557740 TDRD6O60522 2096 aaKnown RBP14.75□□□□□ -0.05
SHMT2-235ENST00000557740 BAHCC1Q9P281 2608 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 LZTS3O60299 673 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-235ENST00000557740 BUB1BO60566 1050 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-235ENST00000557740 FTLP02792 175 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-235ENST00000557740 MYBL1P10243 752 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 GZMAP12544 262 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 ERCC2P18074 760 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 HTR1BP28222 390 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 MIPP30301 263 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 PRKCIP41743 596 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 CSNK1DP48730 415 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 ZNF165P49910 485 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 PEX5P50542 639 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 ZNF135P52742 658 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-235ENST00000557740 PCBP4P57723 403 aaKnown RBP14.75□□□□□ -0.05
SHMT2-235ENST00000557740 CCDC173Q0VFZ6 552 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 ELOCQ15369 112 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 WSCD2Q2TBF2 565 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 E4F1Q66K89 784 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-235ENST00000557740 ESRP1Q6NXG1 681 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms