RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CMA1P23946 247 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 CHRNA3P32297 505 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 GPD2P43304 727 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 RPL34P49207 117 aaKnown RBP5.97□□□□□ -1.45
VPS33B-207ENST00000557470 PSMA6P60900 246 aaKnown RBP5.97□□□□□ -1.45
VPS33B-207ENST00000557470 SRSF6Q13247 344 aaKnown RBP5.97□□□□□ -1.45
VPS33B-207ENST00000557470 EIF4EBP2Q13542 120 aaPredicted RBP5.97□□□□□ -1.45
VPS33B-207ENST00000557470 PKP1Q13835 747 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 FGL2Q14314 439 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 STILQ15468 1287 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 DEFB133Q30KQ1 61 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 C11orf91Q3C1V1 193 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 TMEM95Q3KNT9 176 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 GRAMD1BQ3KR37 738 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 PLA2G4EQ3MJ16 856 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 TM4SF20Q53R12 229 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 INO80DQ53TQ3 878 aaPredicted RBP5.97□□□□□ -1.45
VPS33B-207ENST00000557470 RABGAP1LQ5R372 815 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 TPRG1LQ5T0D9 272 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 DENND1BQ6P3S1 775 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 NXPE4Q6UWF7 544 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 KYAT3Q6YP21 454 aaKnown RBP5.97□□□□□ -1.45
VPS33B-207ENST00000557470 SLCO4C1Q6ZQN7 724 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 ERN2Q76MJ5 926 aaKnown RBP5.97□□□□□ -1.45
VPS33B-207ENST00000557470 BEND5Q7L4P6 421 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 PARGQ86W56 976 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 ATP6V0D2Q8N8Y2 350 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 CHST14Q8NCH0 376 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 TMIEQ8NEW7 156 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 ATL2Q8NHH9 583 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 WDR36Q8NI36 951 aaKnown RBP5.97□□□□□ -1.45
VPS33B-207ENST00000557470 GRIN3AQ8TCU5 1115 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 ANP32BQ92688 251 aaKnown RBP5.97□□□□□ -1.45
VPS33B-207ENST00000557470 EXTL1Q92935 676 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 SLC35C1Q96A29 364 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 CCDC47Q96A33 483 aaKnown RBP5.97□□□□□ -1.45
VPS33B-207ENST00000557470 BMFQ96LC9 184 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 RPRD1AQ96P16 312 aaPredicted RBP5.97□□□□□ -1.45
VPS33B-207ENST00000557470 PPCSQ9HAB8 311 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 POPDC2Q9HBU9 364 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 NCKIPSDQ9NZQ3 722 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 ZIM2Q9NZV7 527 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 RCOR1Q9UKL0 485 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 HS3ST2Q9Y278 367 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 CSNK1G3Q9Y6M4 447 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 UTP20O75691 2785 aaKnown RBP5.97□□□□□ -1.45
VPS33B-207ENST00000557470 RP1P56715 2156 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 BSNQ9UPA5 3926 aa5.97□□□□□ -1.45
VPS33B-207ENST00000557470 UNC79Q9P2D8 2635 aa5.96□□□□□ -1.45
VPS33B-207ENST00000557470 USP9YO00507 2555 aaPredicted RBP5.96□□□□□ -1.46
VPS33B-207ENST00000557470 NOTCH2Q04721 2471 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 SYNJ2BP-COX16A0A087WUM0 186 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 CCDC187A0A096LP49 1063 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 GOLGA6CA6NDK9 693 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 GOLGA6BA6NDN3 693 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 E5RJQ4 531 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 SUV39H1O43463 412 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 SMAD6O43541 496 aaKnown RBP5.96□□□□□ -1.46
VPS33B-207ENST00000557470 NOBOXO60393 691 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 SNAP91O60641 907 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 GCATO75600 419 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 PAK4O96013 591 aaPredicted RBP5.96□□□□□ -1.46
VPS33B-207ENST00000557470 PRNPP04156 253 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 FAM87AP0C7U9 286 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 GOLGA6DP0CG33 693 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 EPXP11678 715 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 ITGB6P18564 788 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 COL8A1P27658 744 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 SLC5A2P31639 672 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 CCR1P32246 355 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 SYKP43405 635 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 RABIFP47224 123 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 NDUFA8P51970 172 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 PMS1P54277 932 aaKnown RBP5.96□□□□□ -1.46
VPS33B-207ENST00000557470 OXCT1P55809 520 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 YWHAZP63104 245 aaKnown RBP5.96□□□□□ -1.46
VPS33B-207ENST00000557470 CCDC15Q0P6D6 951 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 EIF2B5Q13144 721 aaKnown RBP5.96□□□□□ -1.46
VPS33B-207ENST00000557470 AUHQ13825 339 aaKnown RBP5.96□□□□□ -1.46
VPS33B-207ENST00000557470 PDE1CQ14123 709 aaPredicted RBP5.96□□□□□ -1.46
VPS33B-207ENST00000557470 MORC3Q14149 939 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 NR0B2Q15466 257 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 TAF5Q15542 800 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 TGIF1Q15583 401 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 ATL3Q6DD88 541 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 C22orf39Q6P5X5 142 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 LINGO4Q6UY18 593 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 LINC00114Q6XXX2 140 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 ATG14Q6ZNE5 492 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 RRAGAQ7L523 313 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 B3GNT8Q7Z7M8 397 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 DCP2Q8IU60 420 aaKnown RBP5.96□□□□□ -1.46
VPS33B-207ENST00000557470 SLC35F3Q8IY50 421 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 RBFAQ8N0V3 343 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 PPM1KQ8N3J5 372 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 ATP11CQ8NB49 1132 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 LMX1AQ8TE12 382 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 NINJ1Q92982 152 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 SGF29Q96ES7 293 aa5.96□□□□□ -1.46
VPS33B-207ENST00000557470 NT5C1BQ96P26 610 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms