RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 PRKCGP05129 697 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 F7P08709 466 aaPredicted RBP9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 HLA-DPA1P20036 260 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 CES1P23141 567 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 PSMA3P25788 255 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 GBP2P32456 591 aaPredicted RBP9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 PLK1P53350 603 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 LIMK2P53671 638 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 ACVR1Q04771 509 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 CDK18Q07002 472 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 NSUN2Q08J23 767 aaKnown RBP eCLIP9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 GPM6BQ13491 265 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 KCNC3Q14003 757 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 SMAD1Q15797 465 aaKnown RBP9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 CNGA3Q16281 694 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 PDK4Q16654 411 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 CGB2Q6NT52 195 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 NCEH1Q6PIU2 408 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 C6orf89Q6UWU4 347 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 STRA8Q7Z7C7 330 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 APCDD1Q8J025 514 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 BBS5Q8N3I7 341 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 DCAF4L2Q8NA75 395 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 LEMD2Q8NC56 503 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 OR13J1Q8NGT2 312 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 FIBINQ8TAL6 211 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 VOPP1Q96AW1 172 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 ZSWIM3Q96MP5 696 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 CINPQ9BW66 212 aaPredicted RBP9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 PRKD2Q9BZL6 878 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 MUC3BQ9H195 1237 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 KCNH6Q9H252 994 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 VPS11Q9H270 941 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 ZDHHC7Q9NXF8 308 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 GGT7Q9UJ14 662 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 GGA2Q9UJY4 613 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 RIMKLBQ9ULI2 386 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 MTO1Q9Y2Z2 717 aaKnown RBP9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 HCFC2Q9Y5Z7 792 aa9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 MYO18AQ92614 2054 aaKnown RBP9.56□□□□□ -0.88
HNRNPC-223ENST00000556142 CXorf51AA0A1B0GTR3 108 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 HEATR9A2RTY3 570 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 GOLGA8TH3BQL2 631 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 CBX4O00257 560 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 COPEO14579 308 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 TPP1O14773 563 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 TMCC1O94876 653 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 NDST3O95803 873 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 GSRP00390 522 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 AHSGP02765 367 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 FGF1P05230 155 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 SERPINF2P08697 491 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 SPRP35270 261 aaPredicted RBP9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 LMAN2Q12907 356 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 PDE1CQ14123 709 aaPredicted RBP9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 ZNF77Q15935 545 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 LINGO4Q6UY18 593 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 MFN1Q8IWA4 741 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 DCLK2Q8N568 766 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 C2CD4AQ8NCU7 369 aaPredicted RBP9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 ACVR1CQ8NER5 493 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 DYDC1Q8WWB3 177 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 SEC16BQ96JE7 1060 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 SRPK1Q96SB4 655 aaKnown RBP9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 NSMCE4AQ9NXX6 385 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 LMCD1Q9NZU5 365 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 VPS51Q9UID3 782 aa9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 INTS6Q9UL03 887 aaKnown RBP9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 MTCL1Q9Y4B5 1905 aaKnown RBP9.55□□□□□ -0.88
HNRNPC-223ENST00000556142 CCDC195A0A1B0GUA6 201 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 CCDC78A2IDD5 438 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 TYW5A2RUC4 315 aaKnown RBP9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 FZD6O60353 706 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 ZNF821O75541 412 aaPredicted RBP9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 VAPBO95292 243 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 MT-CO1P00395 513 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 PENKP01210 267 aaPredicted RBP9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 VIMP08670 466 aaKnown RBP9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 SCNN1BP51168 640 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 ARSDP51689 593 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 USP4Q13107 963 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 DUSP6Q16828 381 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 HHATQ5VTY9 493 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 FSTL4Q6MZW2 842 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 GRASPQ7Z6J2 395 aaPredicted RBP9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 CPLX4Q7Z7G2 160 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 ZC3HC1Q86WB0 502 aaKnown RBP9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 NDUFAF2Q8N183 169 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 DDI1Q8WTU0 396 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 SPOCK2Q92563 424 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 ZNF75CPQ92670 426 aaPredicted RBP9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 PTPRN2Q92932 1015 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 PEX13Q92968 403 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 IFT43Q96FT9 208 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 FAM111AQ96PZ2 611 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 GPR22Q99680 433 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 PAIP2Q9BPZ3 127 aaKnown RBP9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 TDRD1Q9BXT4 1180 aaKnown RBP9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 FAM107BQ9H098 131 aa9.54□□□□□ -0.88
HNRNPC-223ENST00000556142 UBE2ZQ9H832 354 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms