RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 GALNT15Q8N3T1 639 aa16.33■□□□□ 0.2
CHGA-204ENST00000556076 TP53I13Q8NBR0 393 aaPredicted RBP16.33■□□□□ 0.2
CHGA-204ENST00000556076 ZNF548Q8NEK5 533 aaPredicted RBP16.33■□□□□ 0.2
CHGA-204ENST00000556076 OR4C6Q8NH72 309 aa16.33■□□□□ 0.2
CHGA-204ENST00000556076 CXorf40AQ8TE69 158 aa16.33■□□□□ 0.2
CHGA-204ENST00000556076 CPEB1Q9BZB8 566 aaKnown RBP16.33■□□□□ 0.2
CHGA-204ENST00000556076 SUV39H2Q9H5I1 410 aa16.33■□□□□ 0.2
CHGA-204ENST00000556076 SP110Q9HB58 689 aa16.33■□□□□ 0.2
CHGA-204ENST00000556076 IPO11Q9UI26 975 aaKnown RBP16.33■□□□□ 0.2
CHGA-204ENST00000556076 ANAPC7Q9UJX3 599 aa16.33■□□□□ 0.2
CHGA-204ENST00000556076 U3KQA8 63 aa16.33■□□□□ 0.2
CHGA-204ENST00000556076 BPTFQ12830 3046 aa16.33■□□□□ 0.2
CHGA-204ENST00000556076 ASXL3Q9C0F0 2248 aa16.33■□□□□ 0.2
CHGA-204ENST00000556076 IGSF10Q6WRI0 2623 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 K7ESM1 405 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 CELA2BP08218 269 aaPredicted RBP16.32■□□□□ 0.2
CHGA-204ENST00000556076 CD48P09326 243 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 MYBL1P10243 752 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 JUPP14923 745 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 XPAP23025 273 aaPredicted RBP16.32■□□□□ 0.2
CHGA-204ENST00000556076 GJC1P36383 396 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 EIF4A3P38919 411 aaKnown RBP16.32■□□□□ 0.2
CHGA-204ENST00000556076 RABIFP47224 123 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 SLC10A7Q0GE19 358 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 ZNF211Q13398 564 aaPredicted RBP16.32■□□□□ 0.2
CHGA-204ENST00000556076 PTPRRQ15256 657 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 IRF4Q15306 451 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 DEFB133Q30KQ1 61 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 ATP13A4Q4VNC1 1196 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 POLNQ7Z5Q5 900 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 SYN2Q92777 582 aaPredicted RBP16.32■□□□□ 0.2
CHGA-204ENST00000556076 TRIM11Q96F44 468 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 APOLD1Q96LR9 279 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 CSPG4P5Q96PW8 444 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 PACSIN1Q9BY11 444 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 PCDH18Q9HCL0 1135 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 MRPL47Q9HD33 250 aaKnown RBP16.32■□□□□ 0.2
CHGA-204ENST00000556076 DKK3Q9UBP4 350 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 LUC7L2Q9Y383 392 aaKnown RBP16.32■□□□□ 0.2
CHGA-204ENST00000556076 PCDHGA1Q9Y5H4 931 aa16.32■□□□□ 0.2
CHGA-204ENST00000556076 LOC400499M0QZD8 3231 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 TSPAN11A1L157 253 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 H3BRJ5 948 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 CBFA2T2O43439 604 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 GCATO75600 419 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 TM7SF2O76062 418 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 CSF2P04141 144 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 CYP1A2P05177 515 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 NME1P15531 152 aaKnown RBP16.31■□□□□ 0.2
CHGA-204ENST00000556076 JUNDP17535 347 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 PCK1P35558 622 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 LIG3P49916 1009 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 DAB2P98082 770 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 INSM1Q01101 510 aaPredicted RBP16.31■□□□□ 0.2
CHGA-204ENST00000556076 SLC25A11Q02978 314 aaKnown RBP16.31■□□□□ 0.2
CHGA-204ENST00000556076 DPYSL2Q16555 572 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 UGP2Q16851 508 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 WSCD2Q2TBF2 565 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 TMEM52BQ4KMG9 183 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 CCDC122Q5T0U0 273 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 FAM182AQ5T1J6 154 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 PARGQ86W56 976 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 PGBD5Q8N414 524 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 LMX1AQ8TE12 382 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 LRRN4Q8WUT4 740 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 FUBP1Q96AE4 644 aaKnown RBP16.31■□□□□ 0.2
CHGA-204ENST00000556076 CINPQ9BW66 212 aaPredicted RBP16.31■□□□□ 0.2
CHGA-204ENST00000556076 NENFQ9UMX5 172 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 ADAMTS20P59510 1910 aa16.31■□□□□ 0.2
CHGA-204ENST00000556076 URB1O60287 2271 aaKnown RBP16.3■□□□□ 0.2
CHGA-204ENST00000556076 LRP4O75096 1905 aa16.3■□□□□ 0.2
CHGA-204ENST00000556076 RIOK3O14730 519 aaKnown RBP16.3■□□□□ 0.2
CHGA-204ENST00000556076 MAP3K6O95382 1288 aa16.3■□□□□ 0.2
CHGA-204ENST00000556076 PEX11BO96011 259 aa16.3■□□□□ 0.2
CHGA-204ENST00000556076 C6P13671 934 aa16.3■□□□□ 0.2
CHGA-204ENST00000556076 ACP1P24666 158 aa16.3■□□□□ 0.2
CHGA-204ENST00000556076 MMP12P39900 470 aa16.3■□□□□ 0.2
CHGA-204ENST00000556076 SSR1P43307 286 aaKnown RBP16.3■□□□□ 0.2
CHGA-204ENST00000556076 HCAR3P49019 387 aa16.3■□□□□ 0.2
CHGA-204ENST00000556076 SCNN1BP51168 640 aa16.3■□□□□ 0.2
CHGA-204ENST00000556076 HNRNPKP61978 463 aaKnown RBP eCLIP16.3■□□□□ 0.2
CHGA-204ENST00000556076 IL10RBQ08334 325 aa16.3■□□□□ 0.2
CHGA-204ENST00000556076 ALKBH5Q6P6C2 394 aaKnown RBP16.3■□□□□ 0.2
CHGA-204ENST00000556076 TMPRSS12Q86WS5 348 aa16.3■□□□□ 0.2
CHGA-204ENST00000556076 PLA2G15Q8NCC3 412 aa16.3■□□□□ 0.2
CHGA-204ENST00000556076 DENND6BQ8NEG7 585 aa16.3■□□□□ 0.2
CHGA-204ENST00000556076 ASB12Q8WXK4 309 aa16.3■□□□□ 0.2
CHGA-204ENST00000556076 OR1A2Q9Y585 309 aa16.3■□□□□ 0.2
CHGA-204ENST00000556076 RP1P56715 2156 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 A0A0U1RQS6 177 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 EIF3CLB5ME19 914 aaKnown RBP16.29■□□□□ 0.2
CHGA-204ENST00000556076 AQP9O43315 295 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 PCCBP05166 539 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 C1SP09871 688 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 IL4RP24394 825 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 ARL4AP40617 200 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 THOP1P52888 689 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 MAXP61244 160 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 RALGDSQ12967 914 aa16.29■□□□□ 0.2
CHGA-204ENST00000556076 LBRQ14739 615 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms