RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 FANCGO15287 622 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 HTRA2O43464 458 aaPredicted RBP7.7□□□□□ -1.18
TDP1-214ENST00000556063 PMPCBO75439 489 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 RPP40O75818 363 aaKnown RBP7.7□□□□□ -1.18
TDP1-214ENST00000556063 PGLSO95336 258 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 PIGNO95427 931 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 NDST3O95803 873 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 CPP00450 1065 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 IGLV3-19P01714 112 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 KRT14P02533 472 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 CTSLP07711 333 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 SP9P0CG40 484 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 CYP2A6P11509 494 aaPredicted RBP7.7□□□□□ -1.18
TDP1-214ENST00000556063 PSMB4P28070 264 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 CD6P30203 668 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 CD68P34810 354 aaPredicted RBP7.7□□□□□ -1.18
TDP1-214ENST00000556063 PXNP49023 591 aaPredicted RBP7.7□□□□□ -1.18
TDP1-214ENST00000556063 SKOR1P84550 965 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 CDK18Q07002 472 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 NIPAL4Q0D2K0 466 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 ELP6Q0PNE2 266 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 CNTN1Q12860 1018 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 DHX34Q14147 1143 aaKnown RBP7.7□□□□□ -1.18
TDP1-214ENST00000556063 UGP2Q16851 508 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 POM121L1PQ3SYA9 428 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 NEK5Q6P3R8 708 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 TSSK4Q6SA08 328 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.7□□□□□ -1.18
TDP1-214ENST00000556063 USP45Q70EL2 814 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 CEP68Q76N32 757 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 MAATS1Q7Z4T9 603 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 LINC00523Q86TU6 105 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 KLHL7Q8IXQ5 586 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 CEP112Q8N8E3 955 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 SPATA4Q8NEY3 305 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 OR14C36Q8NHC7 312 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 SPOCK2Q92563 424 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 SLCO2A1Q92959 643 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 RMDN1Q96DB5 314 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 ECHDC3Q96DC8 303 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 ZNF419Q96HQ0 510 aaPredicted RBP7.7□□□□□ -1.18
TDP1-214ENST00000556063 FEM1CQ96JP0 617 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 RBM15Q96T37 977 aaKnown RBP eCLIP7.7□□□□□ -1.18
TDP1-214ENST00000556063 TDRD1Q9BXT4 1180 aaKnown RBP7.7□□□□□ -1.18
TDP1-214ENST00000556063 TPSD1Q9BZJ3 242 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 DDX47Q9H0S4 455 aaKnown RBP7.7□□□□□ -1.18
TDP1-214ENST00000556063 PCED1AQ9H1Q7 454 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 SLC6A17Q9H1V8 727 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 NEUROG2Q9H2A3 272 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 KDM4CQ9H3R0 1056 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 PCYOX1Q9UHG3 505 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 CYP8B1Q9UNU6 501 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 PCDHB9Q9Y5E1 797 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 PCDHGC4Q9Y5F7 938 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 PCDHGA2Q9Y5H1 932 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 XIRP2A4UGR9 3374 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.69□□□□□ -1.18
TDP1-214ENST00000556063 TBC1D3DA0A087WVF3 549 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 TBC1D3IA0A087WXS9 549 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 TBC1D3EA0A087X179 549 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 TBC1D3KA0A087X1G2 549 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 TTC24A2A3L6 582 aaPredicted RBP7.69□□□□□ -1.18
TDP1-214ENST00000556063 CTAGE15A4D2H0 777 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 TBC1D3FA6NER0 549 aaPredicted RBP7.69□□□□□ -1.18
TDP1-214ENST00000556063 TBC1D3LB9A6J9 549 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 AP3B1O00203 1094 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 PDE2AO00408 941 aaPredicted RBP7.69□□□□□ -1.18
TDP1-214ENST00000556063 TRAFD1O14545 582 aaPredicted RBP7.69□□□□□ -1.18
TDP1-214ENST00000556063 TSPAN6O43657 245 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 AP1G1O43747 822 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 PCDH8O95206 1070 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 SEMA4FO95754 770 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 TBC1D3HP0C7X1 549 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 CTAGE8P0CG41 777 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 TDGF1P13385 188 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 ADRB3P13945 408 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 TIMP2P16035 220 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 HLA-DPA1P20036 260 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 RPL22P35268 128 aaKnown RBP7.69□□□□□ -1.18
TDP1-214ENST00000556063 DRD3P35462 400 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 NUDT1P36639 197 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 P2RY2P41231 377 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 GRIA4P48058 902 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 PTPN5P54829 565 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 GDF10P55107 478 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 WNT3AP56704 352 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 FAM193AP78312 1265 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 SARNPP82979 210 aaKnown RBP7.69□□□□□ -1.18
TDP1-214ENST00000556063 CDK16Q00536 496 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 DR1Q01658 176 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 TRAF2Q12933 501 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 GPS1Q13098 491 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 ELF2Q15723 593 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 PCSK7Q16549 785 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 MAP7D1Q3KQU3 841 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 TBC1D3GQ6DHY5 549 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 TBC1D3CQ6IPX1 549 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 NAPEPLDQ6IQ20 393 aa7.69□□□□□ -1.18
TDP1-214ENST00000556063 PARS2Q7L3T8 475 aaKnown RBP7.69□□□□□ -1.18
TDP1-214ENST00000556063 LPCAT2Q7L5N7 544 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms