RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 PKP2Q99959 881 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 EFHD1Q9BUP0 239 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 SLC25A23Q9BV35 468 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 SLC2A11Q9BYW1 496 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 TRPV6Q9H1D0 765 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 SMOC2Q9H3U7 446 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 VPS45Q9NRW7 570 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 OSER1Q9NX31 292 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 PCDHGA7Q9Y5G6 932 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 TRPV2Q9Y5S1 764 aa16.3■□□□□ 0.2
TUBB3-209ENST00000555609 ARHGAP10A1A4S6 786 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 PSMD12O00232 456 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-209ENST00000555609 MYCNP04198 464 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-209ENST00000555609 TFAP2AP05549 437 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 ZNF865P0CJ78 1059 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-209ENST00000555609 MRPS6P82932 125 aaKnown RBP16.29■□□□□ 0.2
TUBB3-209ENST00000555609 UPP1Q16831 310 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 BTBD8Q5XKL5 378 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 CNSTQ6PJW8 725 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 EP400NLQ6ZTU2 488 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 SATL1Q86VE3 508 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 SPATA24Q86W54 205 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 LILRA2Q8N149 483 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 RTL3Q8N8U3 475 aaKnown RBP16.29■□□□□ 0.2
TUBB3-209ENST00000555609 USP13Q92995 863 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-209ENST00000555609 C1orf74Q96LT6 269 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 UHRF1Q96T88 793 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-209ENST00000555609 GAD1Q99259 594 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 ATP13A1Q9HD20 1204 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 UBAP1Q9NZ09 502 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 AP4S1Q9Y587 144 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 TRIM24O15164 1050 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 SLC7A4O43246 635 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 KPNA6O60684 536 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 PAGE1O75459 146 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 GPC4O75487 556 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 STAMBPO95630 424 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 JUNP05412 331 aaKnown RBP16.29■□□□□ 0.2
TUBB3-209ENST00000555609 HLA-DQB2P05538 268 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 SNRPB2P08579 225 aaKnown RBP16.29■□□□□ 0.2
TUBB3-209ENST00000555609 RABGGTBP53611 331 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 LAMB3Q13751 1172 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 SLC5A9Q2M3M2 681 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 TMEM259Q4ZIN3 620 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 SAMD4BQ5PRF9 694 aaKnown RBP16.29■□□□□ 0.2
TUBB3-209ENST00000555609 MORN1Q5T089 497 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 KDELC1Q6UW63 502 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 B3GNT6Q6ZMB0 384 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 ARHGAP36Q6ZRI8 547 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 TMA16Q96EY4 203 aaKnown RBP16.29■□□□□ 0.2
TUBB3-209ENST00000555609 UBXN10Q96LJ8 280 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 PKMYT1Q99640 499 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 NPAS2Q99743 824 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 RTP3Q9BQQ7 232 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 OSBPL11Q9BXB4 747 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 RHOBTB2Q9BYZ6 727 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 SPAG4Q9NPE6 437 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 ADA2Q9NZK5 511 aa16.29■□□□□ 0.2
TUBB3-209ENST00000555609 A8MT66 165 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 BBIP1A8MTZ0 92 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 HSPA8P11142 646 aaKnown RBP16.28■□□□□ 0.2
TUBB3-209ENST00000555609 CD1EP15812 388 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 IMPDH1P20839 514 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 SLC7A1P30825 629 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 RENBPP51606 427 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 NR1H2P55055 460 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 NFKB2Q00653 900 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 TNK2Q07912 1038 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 MAP2K5Q13163 448 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 PDAP1Q13442 181 aaKnown RBP16.28■□□□□ 0.2
TUBB3-209ENST00000555609 APOFQ13790 326 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 FASTKQ14296 549 aaKnown RBP16.28■□□□□ 0.2
TUBB3-209ENST00000555609 SPATS1Q496A3 300 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 TIGD5Q53EQ6 642 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 OLFML2BQ68BL8 750 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 REP15Q6BDI9 236 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 CUZD1Q86UP6 607 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 THEM5Q8N1Q8 247 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 GOLM1Q8NBJ4 401 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 PBXIP1Q96AQ6 731 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 ROPN1LQ96C74 230 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 L3HYPDHQ96EM0 354 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 MOCOSQ96EN8 888 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 ZNF597Q96LX8 424 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 KLHL32Q96NJ5 620 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 HAUS8Q9BT25 410 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 SIK2Q9H0K1 926 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 CACNA2D2Q9NY47 1150 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 SLC2A6Q9UGQ3 507 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 PACSIN3Q9UKS6 424 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 DMTF1Q9Y222 760 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 TIMM13Q9Y5L4 95 aaPredicted RBP16.28■□□□□ 0.2
TUBB3-209ENST00000555609 PCNTO95613 3336 aa16.28■□□□□ 0.2
TUBB3-209ENST00000555609 TCRBV3S1A0A5B6 114 aa16.27■□□□□ 0.2
TUBB3-209ENST00000555609 KLHL33A6NCF5 533 aa16.27■□□□□ 0.2
TUBB3-209ENST00000555609 ZNF26P17031 533 aaPredicted RBP16.27■□□□□ 0.2
TUBB3-209ENST00000555609 BDNFP23560 247 aa16.27■□□□□ 0.2
TUBB3-209ENST00000555609 SERPINH1P50454 418 aaKnown RBP16.27■□□□□ 0.2
TUBB3-209ENST00000555609 NDST2P52849 883 aa16.27■□□□□ 0.2
TUBB3-209ENST00000555609 WNT3AP56704 352 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms