RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 PIRTP0C851 137 aa15.8■□□□□ 0.12
ARHGEF40-203ENST00000554514 ARPP19P56211 112 aa15.8■□□□□ 0.12
ARHGEF40-203ENST00000554514 NME5P56597 212 aa15.8■□□□□ 0.12
ARHGEF40-203ENST00000554514 C1QTNF8P60827 252 aa15.8■□□□□ 0.12
ARHGEF40-203ENST00000554514 SULT2A1Q06520 285 aa15.8■□□□□ 0.12
ARHGEF40-203ENST00000554514 TUSC3Q13454 348 aa15.8■□□□□ 0.12
ARHGEF40-203ENST00000554514 PSMD5Q16401 504 aa15.8■□□□□ 0.12
ARHGEF40-203ENST00000554514 MANEALQ5VSG8 457 aa15.8■□□□□ 0.12
ARHGEF40-203ENST00000554514 KIAA0930Q6ICG6 404 aaPredicted RBP15.8■□□□□ 0.12
ARHGEF40-203ENST00000554514 NOL6Q9H6R4 1146 aaKnown RBP15.8■□□□□ 0.12
ARHGEF40-203ENST00000554514 CLIC5Q9NZA1 410 aa15.8■□□□□ 0.12
ARHGEF40-203ENST00000554514 A0A087X1B8 175 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 A8MT66 165 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 SLCO1B7G3V0H7 640 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 B4GALT3O60512 393 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 PGM3O95394 542 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 FESP07332 822 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 ME2P23368 584 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 SERPINH1P50454 418 aaKnown RBP15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 ARSDP51689 593 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 ZNF157P51786 506 aaPredicted RBP15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 PRKAA2P54646 552 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 POU4F1Q01851 419 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 RALGDSQ12967 914 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 PDAP1Q13442 181 aaKnown RBP15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 PTK2BQ14289 1009 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 GPR158Q5T848 1215 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 PGAM4Q8N0Y7 254 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 PSMG2Q969U7 264 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 PCDHAC1Q9H158 963 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 PCDHGB4Q9UN71 923 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 PCDHGB5Q9Y5G0 923 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 TCAF2A6NFQ2 919 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 UNCXA6NJT0 531 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 PRAMEP78395 509 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 TRIM32Q13049 653 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 AGKQ53H12 422 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 MAP3K21Q5TCX8 1036 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 PIWIL4Q7Z3Z4 852 aaKnown RBP15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 CUZD1Q86UP6 607 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 SERINC5Q86VE9 423 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 CPSF7Q8N684 471 aaKnown RBP15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 CEP70Q8NHQ1 597 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 HDAC10Q969S8 669 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 CNBD2Q96M20 576 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 CCDC28BQ9BUN5 200 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 TRIM4Q9C037 500 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 ZNF385DQ9H6B1 395 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 TBC1D13Q9NVG8 400 aa15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.79■□□□□ 0.12
ARHGEF40-203ENST00000554514 HEATR9A2RTY3 570 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 TRPC5OSA6NMA1 111 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 TNFRSF10BO14763 440 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 AHCYL1O43865 530 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 DUSP11O75319 330 aaKnown RBP15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 USP46P62068 366 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 ZNF33AQ06730 810 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 EIF4EBP2Q13542 120 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 TLR1Q15399 786 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 TECRLQ5HYJ1 363 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 HECTD2Q5U5R9 776 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 MARC1Q5VT66 337 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 SETD3Q86TU7 594 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 ZNF280BQ86YH2 543 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 APLFQ8IW19 511 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 KLHL32Q96NJ5 620 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 TRAPPC9Q96Q05 1148 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 TRIM62Q9BVG3 475 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 ZDHHC7Q9NXF8 308 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 MARCH4Q9P2E8 410 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 NOD1Q9Y239 953 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 Q9Y3F1 56 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 MYOCOSA0A1B0GUC4 107 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 GPC4O75487 556 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 SUPT7LO94864 414 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 CYP11A1P05108 521 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 YWHAQP27348 245 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 GRIA2P42262 883 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 CDKN2DP55273 166 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 CDH13P55290 713 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 GK3PQ14409 553 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 IHHQ14623 411 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 MAPRE1Q15691 268 aaKnown RBP15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 AGAP9Q5VTM2 703 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 KLC3Q6P597 504 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 KDELC1Q6UW63 502 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 LILRA2Q8N149 483 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 TTC9BQ8N6N2 239 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 OR52K2Q8NGK3 314 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 OR9I1Q8NGQ6 314 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 PKP2Q99959 881 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 MRPL1Q9BYD6 325 aaKnown RBP15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 SEMA6AQ9H2E6 1030 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 GMIPQ9P107 970 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 UXTQ9UBK9 157 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 DSEQ9UL01 958 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 C15orf38-AP3S2A0A0A6YYH1 394 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 M0QZQ0 153 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 NPHS1O60500 1241 aa15.78■□□□□ 0.12
ARHGEF40-203ENST00000554514 IPO13O94829 963 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms