RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 FAM72BQ86X60 149 aa14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 ZNF683Q8IZ20 524 aa14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 CACTIN-AS1Q8N1I8 211 aa14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 SLC25A45Q8N413 288 aa14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 UBL4BQ8N7F7 174 aa14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 DCBLD1Q8N8Z6 715 aa14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 EXD1Q8NHP7 514 aa14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 ALG14Q96F25 216 aa14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 HAPLN3Q96S86 360 aa14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 HERPUD2Q9BSE4 406 aa14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 FEM1AQ9BSK4 669 aa14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 OSBPL2Q9H1P3 480 aa14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 CARD9Q9H257 536 aa14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 PCDH18Q9HCL0 1135 aa14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 PREBQ9HCU5 417 aa14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 RRAGDQ9NQL2 400 aaPredicted RBP14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 DDX56Q9NY93 547 aaKnown RBP14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 NEU3Q9UQ49 428 aa14.24□□□□□ -0.13
SPTLC2-202ENST00000554365 SHROOM3Q8TF72 1996 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 MYLKQ15746 1914 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 A0A1W2PQU0 124 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 ZNF185O15231 689 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 ALOX15BO15296 676 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 DGKAP23743 735 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 KDELR1P24390 212 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 VASPP50552 380 aaPredicted RBP14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 TAS2R38P59533 333 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 CXADRP78310 365 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 TLE3Q04726 772 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 AUHQ13825 339 aaKnown RBP14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 DPYSL3Q14195 570 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 MANEALQ5VSG8 457 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 MFSD7Q6UXD7 560 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 C14orf80Q86SX3 495 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 SH2D3CQ8N5H7 860 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 OR4C6Q8NH72 309 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 ZNF592Q92610 1267 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 RNF25Q96BH1 459 aaPredicted RBP14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 FAF2Q96CS3 445 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 NAF1Q96HR8 494 aaKnown RBP14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 LGMNQ99538 433 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 CALN1Q9BXU9 219 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 MUC3BQ9H195 1237 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 DHX35Q9H5Z1 703 aaKnown RBP14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 FZD3Q9NPG1 666 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 UCKL1Q9NWZ5 548 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 FARP1Q9Y4F1 1045 aaPredicted RBP14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 PCDHB1Q9Y5F3 818 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 HS3ST4Q9Y661 456 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 ASXL3Q9C0F0 2248 aa14.23□□□□□ -0.13
SPTLC2-202ENST00000554365 TEX51A0A1B0GUA7 166 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 LRRD1A4D1F6 860 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 KPNA3O00505 521 aaPredicted RBP14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 CES2O00748 559 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 CTSLP07711 333 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 SRCP12931 536 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 PTPN7P35236 360 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 CDKN2BP42772 138 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 CDH6P55285 790 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 NRG1Q02297 640 aaPredicted RBP14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 MMRN1Q13201 1228 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 ARL13BQ3SXY8 428 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 EFHC2Q5JST6 749 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 PIP5KL1Q5T9C9 394 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 SPOCD1Q6ZMY3 1216 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 SPACA3Q8IXA5 215 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 RCOR2Q8IZ40 523 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 RASGEF1CQ8N431 466 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 ATP11CQ8NB49 1132 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 LSM14AQ8ND56 463 aaKnown RBP14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 OR13H1Q8NG92 308 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 KIF18AQ8NI77 898 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 PBKQ96KB5 322 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 SIK2Q9H0K1 926 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 CAAP1Q9H8G2 361 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 DYRK4Q9NR20 520 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 CWC15Q9P013 229 aaKnown RBP14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 OR51B4Q9Y5P0 310 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 SAR1BQ9Y6B6 198 aa14.22□□□□□ -0.13
SPTLC2-202ENST00000554365 KNTC1P50748 2209 aa14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 hCG_1818297A0A087WSY0 165 aa14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 ZNF487B1APH4 448 aa14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 K7ERQ8 282 aa14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 CLDN11O75508 207 aa14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 PCDH8O95206 1070 aa14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 ZRANB2O95218 330 aaKnown RBP eCLIP14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 MT-CO1P00395 513 aa14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 MPOP05164 745 aa14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 ALPPL2P10696 532 aa14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 TCP1P17987 556 aaKnown RBP14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 AKT2P31751 481 aa14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 CHRNA3P32297 505 aa14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 CLDN2P57739 230 aa14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 ADCY2Q08462 1091 aa14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 CCDC15Q0P6D6 951 aa14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 PDK2Q15119 407 aa14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 PPP2R5EQ16537 467 aa14.21□□□□□ -0.13
SPTLC2-202ENST00000554365 ZNF605Q86T29 641 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms