RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 ATP6V1B2P21281 511 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 ADORA2AP29274 412 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 SERPINH1P50454 418 aaKnown RBP9.62□□□□□ -0.87
SIX4-202ENST00000554079 CHRNDQ07001 517 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 MGAT3Q09327 533 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 COX10Q12887 443 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 IKQ13123 557 aaPredicted RBP9.62□□□□□ -0.87
SIX4-202ENST00000554079 KCNJ11Q14654 390 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 PLCL1Q15111 1095 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 SKIV2LQ15477 1246 aaKnown RBP9.62□□□□□ -0.87
SIX4-202ENST00000554079 MAPRE2Q15555 327 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 FAM214AQ32MH5 1076 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 C6orf132Q5T0Z8 1188 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 TRAPPC3LQ5T215 181 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 MROH9Q5TGP6 573 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 KRT39Q6A163 491 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 SYCE2Q6PIF2 218 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 MON1BQ7L1V2 547 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 USP17L1Q7RTZ2 530 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 NOXA1Q86UR1 476 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 PIGZQ86VD9 579 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 SLFN12Q8IYM2 578 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 NLGN4XQ8N0W4 816 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 KCNH5Q8NCM2 988 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 SHCBP1Q8NEM2 672 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 BEST2Q8NFU1 509 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 OR7A2PQ8NGA2 310 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 PROX1Q92786 737 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 USB1Q9BQ65 265 aaKnown RBP9.62□□□□□ -0.87
SIX4-202ENST00000554079 TRIM15Q9C019 465 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 UNC93B1Q9H1C4 597 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 RAVER2Q9HCJ3 691 aaKnown RBP9.62□□□□□ -0.87
SIX4-202ENST00000554079 ZBTB26Q9HCK0 441 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 NECTIN3Q9NQS3 549 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 ZNF277Q9NRM2 450 aaPredicted RBP9.62□□□□□ -0.87
SIX4-202ENST00000554079 PAK1IP1Q9NWT1 392 aaPredicted RBP9.62□□□□□ -0.87
SIX4-202ENST00000554079 SMPD3Q9NY59 655 aaPredicted RBP9.62□□□□□ -0.87
SIX4-202ENST00000554079 COQ3Q9NZJ6 369 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 ATP6V1HQ9UI12 483 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 USP21Q9UK80 565 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 DIMT1Q9UNQ2 313 aaKnown RBP9.62□□□□□ -0.87
SIX4-202ENST00000554079 H0Y858 1186 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 M0R3G1 203 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 MEIS1O00470 390 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 TOR1AO14656 332 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 EI24O14681 340 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 TRDMT1O14717 391 aaKnown RBP9.61□□□□□ -0.87
SIX4-202ENST00000554079 DNAJB5O75953 348 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 MAP3K6O95382 1288 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 CALCAP01258 141 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 SPATA31C1P0DKV0 1188 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 CRHBPP24387 322 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 CD68P34810 354 aaPredicted RBP9.61□□□□□ -0.87
SIX4-202ENST00000554079 ZNF76P36508 570 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 CLK2P49760 499 aaKnown RBP9.61□□□□□ -0.87
SIX4-202ENST00000554079 PSMC5P62195 406 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 YWHAZP63104 245 aaKnown RBP9.61□□□□□ -0.87
SIX4-202ENST00000554079 FPGSQ05932 587 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 PLA2G4EQ3MJ16 856 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 C2CD6Q53TS8 623 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 RBM48Q5RL73 367 aaKnown RBP9.61□□□□□ -0.87
SIX4-202ENST00000554079 NXNL2Q5VZ03 156 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 ILDR2Q71H61 639 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 OR7D4Q8NG98 312 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 OR4M2Q8NGB6 313 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 SLC22A17Q8WUG5 538 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 FIZ1Q96SL8 496 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 KIFC1Q9BW19 673 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 RHOBTB2Q9BYZ6 727 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 MIR1-1HGQ9H1L0 117 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 CYP26B1Q9NR63 512 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 TLR9Q9NR96 1032 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 CCM2LQ9NUG4 571 aaPredicted RBP9.61□□□□□ -0.87
SIX4-202ENST00000554079 FBXO28Q9NVF7 368 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 OAZ3Q9UMX2 235 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 PCDHGA10Q9Y5H3 936 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 CNTNAP1P78357 1384 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 A0A0B4J203 849 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 FAM149AA5PLN7 773 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 PABPN1LA6NDY0 278 aaKnown RBP9.61□□□□□ -0.87
SIX4-202ENST00000554079 FAM159BA6NKW6 160 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 C16orf96A6NNT2 1141 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 H3BMM5 538 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 hCG_1984214I3L0E3 225 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 AP3D1O14617 1153 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 SSX4O60224 188 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 SNAP29O95721 258 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 BTF3P20290 206 aaKnown RBP9.61□□□□□ -0.87
SIX4-202ENST00000554079 MAGP20916 626 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 ATP2B4P23634 1241 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 DNAJB2P25686 324 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 ATICP31939 592 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 CDKN2BP42772 138 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 HAAOP46952 286 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 GCLMP48507 274 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 SERPINB9P50453 376 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 POLR2GP62487 172 aaKnown RBP eCLIP9.61□□□□□ -0.87
SIX4-202ENST00000554079 GTF2IP78347 998 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 ZNF33BQ06732 778 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 SPIRE1Q08AE8 756 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms