RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 AP1G1O43747 822 aa14.96□□□□□ -0.01
MTHFD1-204ENST00000553405 ATXN1LP0C7T5 689 aaKnown RBP14.96□□□□□ -0.01
MTHFD1-204ENST00000553405 ITIH2P19823 946 aa14.96□□□□□ -0.01
MTHFD1-204ENST00000553405 ITKQ08881 620 aa14.96□□□□□ -0.01
MTHFD1-204ENST00000553405 UGP2Q16851 508 aa14.96□□□□□ -0.01
MTHFD1-204ENST00000553405 TTC31Q49AM3 519 aaPredicted RBP14.96□□□□□ -0.01
MTHFD1-204ENST00000553405 CCDC137Q6PK04 289 aaKnown RBP14.96□□□□□ -0.01
MTHFD1-204ENST00000553405 KBTBD6Q86V97 674 aa14.96□□□□□ -0.01
MTHFD1-204ENST00000553405 PGBD3Q8N328 593 aa14.96□□□□□ -0.01
MTHFD1-204ENST00000553405 TOE1Q96GM8 510 aaKnown RBP14.96□□□□□ -0.01
MTHFD1-204ENST00000553405 VPS45Q9NRW7 570 aa14.96□□□□□ -0.01
MTHFD1-204ENST00000553405 RSPH14Q9UHP6 348 aa14.96□□□□□ -0.01
MTHFD1-204ENST00000553405 GGT7Q9UJ14 662 aa14.96□□□□□ -0.01
MTHFD1-204ENST00000553405 INVSQ9Y283 1065 aa14.96□□□□□ -0.01
MTHFD1-204ENST00000553405 FADS3Q9Y5Q0 445 aa14.96□□□□□ -0.01
MTHFD1-204ENST00000553405 TNRC6BQ9UPQ9 1833 aaKnown RBP14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 SPAG17Q6Q759 2223 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 UPK3BL1B0FP48 263 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 ESPNB1AK53 854 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 UPK3BL2E5RIL1 263 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 RNASEH2AO75792 299 aaKnown RBP14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 STK10O94804 968 aaKnown RBP14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 CD6P30203 668 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 OXTRP30559 389 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 MMP12P39900 470 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 NEK3P51956 506 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 WNT3AP56704 352 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 MSLNQ13421 630 aaPredicted RBP14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 PTPRRQ15256 657 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 PARP6Q2NL67 630 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 LRRC73Q5JTD7 316 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 ITPRIPL1Q6GPH6 555 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 CBARPQ8N350 705 aaPredicted RBP14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 SPATA4Q8NEY3 305 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 PPP1R16AQ96I34 528 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 FEM1CQ96JP0 617 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 PRRX2Q99811 253 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 ORAI3Q9BRQ5 295 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 SGK2Q9HBY8 427 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 PCDH9Q9HC56 1237 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 HAUS2Q9NVX0 235 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 UBP1Q9NZI7 540 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 FAM153AQ9UHL3 310 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 CHKBQ9Y259 395 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 PCDHB9Q9Y5E1 797 aa14.95□□□□□ -0.02
MTHFD1-204ENST00000553405 LRRK1Q38SD2 2015 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 GOLGA6L10A0A0M3HER8 536 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 H0Y858 1186 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 CCDC188H7C350 402 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 RIOK3O14730 519 aaKnown RBP14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 NEBLO76041 1014 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 URI1O94763 535 aaPredicted RBP14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 IFNB1P01574 187 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 EPOP01588 193 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 PRKCGP05129 697 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 IGHV4-34P06331 123 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 ACADMP11310 421 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 GM2AP17900 193 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 SUOXP51687 545 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 RPL26P61254 145 aaKnown RBP14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 RALGDSQ12967 914 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 MPP3Q13368 585 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 OLIG2Q13516 323 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 SEMA5AQ13591 1074 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 CDKN3Q16667 212 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 QPCTQ16769 361 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 WHAMMP3Q1A5X7 153 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 TMEM259Q4ZIN3 620 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 USP39Q53GS9 565 aaKnown RBP14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 ARMC12Q5T9G4 340 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 FAXCQ5TGI0 409 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 DENND5AQ6IQ26 1287 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 RANBP10Q6VN20 620 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 ARHGEF18Q6ZSZ5 1173 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 FAM124AQ86V42 546 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 KIF18AQ8NI77 898 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 ZNF592Q92610 1267 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 RAB7BQ96AH8 199 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 OMDQ99983 421 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 FERMT1Q9BQL6 677 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 DUSP15Q9H1R2 295 aaPredicted RBP14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 KCNH6Q9H252 994 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 C6orf106Q9H6K1 298 aaPredicted RBP14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 PCDH12Q9NPG4 1184 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 RPL26L1Q9UNX3 145 aaKnown RBP14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 ITM2BQ9Y287 266 aa14.94□□□□□ -0.02
MTHFD1-204ENST00000553405 DOCK9Q9BZ29 2069 aa14.93□□□□□ -0.02
MTHFD1-204ENST00000553405 A0A0J9YYE9 177 aa14.93□□□□□ -0.02
MTHFD1-204ENST00000553405 A0A1W2PQ67 120 aa14.93□□□□□ -0.02
MTHFD1-204ENST00000553405 PMPCBO75439 489 aa14.93□□□□□ -0.02
MTHFD1-204ENST00000553405 RPP40O75818 363 aaKnown RBP14.93□□□□□ -0.02
MTHFD1-204ENST00000553405 SEMA4FO95754 770 aa14.93□□□□□ -0.02
MTHFD1-204ENST00000553405 CPP00450 1065 aa14.93□□□□□ -0.02
MTHFD1-204ENST00000553405 TRBC1P01850 177 aa14.93□□□□□ -0.02
MTHFD1-204ENST00000553405 LHCGRP22888 699 aa14.93□□□□□ -0.02
MTHFD1-204ENST00000553405 IVDP26440 423 aa14.93□□□□□ -0.02
MTHFD1-204ENST00000553405 CNR2P34972 360 aa14.93□□□□□ -0.02
MTHFD1-204ENST00000553405 PAFAH1B1P43034 410 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms