RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 B3GNT4Q9C0J1 378 aa9.97□□□□□ -0.81
TRAFD1-207ENST00000550051 STRADBQ9C0K7 418 aa9.97□□□□□ -0.81
TRAFD1-207ENST00000550051 PDCL3Q9H2J4 239 aa9.97□□□□□ -0.81
TRAFD1-207ENST00000550051 NPDC1Q9NQX5 325 aaPredicted RBP9.97□□□□□ -0.81
TRAFD1-207ENST00000550051 STARD5Q9NSY2 213 aa9.97□□□□□ -0.81
TRAFD1-207ENST00000550051 TMEM248Q9NWD8 314 aa9.97□□□□□ -0.81
TRAFD1-207ENST00000550051 GULP1Q9UBP9 304 aa9.97□□□□□ -0.81
TRAFD1-207ENST00000550051 RABGEF1Q9UJ41 708 aa9.97□□□□□ -0.81
TRAFD1-207ENST00000550051 APPL1Q9UKG1 709 aa9.97□□□□□ -0.81
TRAFD1-207ENST00000550051 MAST4O15021 2626 aa9.96□□□□□ -0.81
TRAFD1-207ENST00000550051 A0A1W2PQM1 296 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 PYCARD-AS1I3L0S3 204 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 MAP3K7O43318 606 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 RASGRP1O95267 797 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 UGT2B4P06133 528 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 PNMA6AP0CW24 399 aaPredicted RBP9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 CTSEP14091 401 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 HOXB1P14653 301 aaPredicted RBP9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 PNLIPP16233 465 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 RAD51Q06609 339 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 ZFP36L1Q07352 338 aaKnown RBP9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 NFATC3Q12968 1075 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 LRRC14Q15048 493 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 ALG11Q2TAA5 492 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 KLHL40Q2TBA0 621 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 WSCD2Q2TBF2 565 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 GKN2Q86XP6 184 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 GPR156Q8NFN8 814 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 CXorf40AQ8TE69 158 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 CENPIQ92674 756 aaPredicted RBP9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 CCDC74AQ96AQ1 378 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 LRRN3Q9H3W5 708 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 KIAA1468Q9P260 1216 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 DNAI1Q9UI46 699 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 DOLKQ9UPQ8 538 aa9.96□□□□□ -0.82
TRAFD1-207ENST00000550051 LRP4O75096 1905 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 NAV2Q8IVL1 2488 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 D6RAR5 112 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 FAM72CH0Y354 149 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 GOLGA8SH3BPF8 625 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 TERTO14746 1132 aaKnown RBP9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 SNPHO15079 494 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 SUV39H1O43463 412 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 BUB1O43683 1085 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 RAMP2O60895 175 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 CELA2BP08218 269 aaPredicted RBP9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 PLEKP08567 350 aaPredicted RBP9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 LIPCP11150 499 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 GLB1P16278 677 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 ITIH2P19823 946 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 HTR1BP28222 390 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 MTIF2P46199 727 aaKnown RBP9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 ATP11AP98196 1134 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 ELP6Q0PNE2 266 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 INPP5AQ14642 412 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 TGIF1Q15583 401 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 MAN2A1Q16706 1144 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 CCDC14Q49A88 953 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 FAM72AQ5TYM5 149 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 FAM72DQ6L9T8 149 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 RWDD4Q6NW29 188 aaKnown RBP9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 ENPP7Q6UWV6 458 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 ATG14Q6ZNE5 492 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 STRADAQ7RTN6 431 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 PRICKLE2Q7Z3G6 844 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 FAM72BQ86X60 149 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 DTX1Q86Y01 620 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 HID1Q8IV36 788 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 KYQ8NBH2 561 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 MSANTD4Q8NCY6 345 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 ATL2Q8NHH9 583 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 TSACCQ96A04 125 aaPredicted RBP9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 GDAP1L1Q96MZ0 367 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 RBM15Q96T37 977 aaKnown RBP eCLIP9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 APOOQ9BUR5 198 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 NAA15Q9BXJ9 866 aaKnown RBP9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 FOXP3Q9BZS1 431 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 NDST4Q9H3R1 872 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 EPB41L5Q9HCM4 733 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 SEPT10Q9P0V9 454 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 GPR34Q9UPC5 381 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 NEU3Q9UQ49 428 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 HEMK1Q9Y5R4 338 aaPredicted RBP9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 DGKBQ9Y6T7 804 aa9.95□□□□□ -0.82
TRAFD1-207ENST00000550051 AHCTF1Q8WYP5 2266 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 A0A1W2PQC6 194 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 CFAP69A5D8W1 941 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 TMCC1O94876 653 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 LRIG2O94898 1065 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 TNFP01375 233 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 RPLP0P05388 317 aaKnown RBP9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 HOXC4P09017 264 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 JMJD7P0C870 316 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 KRT10P13645 584 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 MMP8P22894 467 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 PTPN9P43378 593 aa9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 YBEYP58557 167 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 SRP54P61011 504 aaKnown RBP9.94□□□□□ -0.82
TRAFD1-207ENST00000550051 NOMO3P69849 1222 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms