RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 CWC15Q9P013 229 aaKnown RBP12.58□□□□□ -0.4
GCN1-204ENST00000548132 PCSK1NQ9UHG2 260 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 HPCAL4Q9UM19 191 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 HELZ2Q9BYK8 2649 aaKnown RBP12.57□□□□□ -0.4
GCN1-204ENST00000548132 A0A087WV48 116 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 ANKRD62A6NC57 917 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 EIF3CLB5ME19 914 aaKnown RBP12.57□□□□□ -0.4
GCN1-204ENST00000548132 SCAMP1O15126 338 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 GCATO75600 419 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 FTLP02792 175 aaPredicted RBP12.57□□□□□ -0.4
GCN1-204ENST00000548132 GYPCP04921 128 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 C6P13671 934 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 PAPOLAP51003 745 aaKnown RBP12.57□□□□□ -0.4
GCN1-204ENST00000548132 PDX1P52945 283 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 SEMG2Q02383 582 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 KLHL30Q0D2K2 578 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 RTP5Q14D33 572 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 DPYSL2Q16555 572 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 SMTNL2Q2TAL5 461 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 TMEM52BQ4KMG9 183 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 ERMARDQ5T6L9 678 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 MACC1Q6ZN28 852 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 ZNF354CQ86Y25 554 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 PELI3Q8N2H9 469 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 FAM181AQ8N9Y4 354 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 FAM174AQ8TBP5 190 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 ARHGEF26Q96DR7 871 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 FEM1CQ96JP0 617 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 EIF3CQ99613 913 aaKnown RBP12.57□□□□□ -0.4
GCN1-204ENST00000548132 CLPBQ9H078 707 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 NAT10Q9H0A0 1025 aaKnown RBP12.57□□□□□ -0.4
GCN1-204ENST00000548132 PCDH12Q9NPG4 1184 aa12.57□□□□□ -0.4
GCN1-204ENST00000548132 A0A1W2PQJ5 194 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 TRAFD1O14545 582 aaPredicted RBP12.56□□□□□ -0.4
GCN1-204ENST00000548132 FPGTO14772 594 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 CCDC172P0C7W6 258 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 HNF1BP35680 557 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 HNRNPKP61978 463 aaKnown RBP eCLIP12.56□□□□□ -0.4
GCN1-204ENST00000548132 FANCCQ00597 558 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 AGERQ15109 404 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 KLHL40Q2TBA0 621 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 WSCD2Q2TBF2 565 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 PPP6R3Q5H9R7 873 aaPredicted RBP12.56□□□□□ -0.4
GCN1-204ENST00000548132 PPP1R2P3Q6NXS1 205 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 GUSBP11Q6P575 273 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 DCP2Q8IU60 420 aaKnown RBP12.56□□□□□ -0.4
GCN1-204ENST00000548132 CAMK1DQ8IU85 385 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 PHACTR4Q8IZ21 702 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 CACTIN-AS1Q8N1I8 211 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 PGBD5Q8N414 524 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 PDXPQ96GD0 296 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 BTBD6Q96KE9 485 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 BBC3Q96PG8 261 aaPredicted RBP12.56□□□□□ -0.4
GCN1-204ENST00000548132 BOCQ9BWV1 1114 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 EDEM3Q9BZQ6 932 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 APOBEC3BQ9UH17 382 aaKnown RBP12.56□□□□□ -0.4
GCN1-204ENST00000548132 SCINQ9Y6U3 715 aa12.56□□□□□ -0.4
GCN1-204ENST00000548132 A0A087X0T9 212 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 PMS2P1A4D2B8 440 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 SMTNL1A8MU46 457 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 RIOK3O14730 519 aaKnown RBP12.55□□□□□ -0.4
GCN1-204ENST00000548132 AQP9O43315 295 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 OPA1O60313 960 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 BRINP1O60477 761 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 FAM228BP0C875 321 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 CDK4P11802 303 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 CR2P20023 1033 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 PCK1P35558 622 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 UGP2Q16851 508 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 DEFB133Q30KQ1 61 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 PERM1Q5SV97 790 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 ZCCHC8Q6NZY4 707 aaKnown RBP12.55□□□□□ -0.4
GCN1-204ENST00000548132 POLNQ7Z5Q5 900 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 PDZD3Q86UT5 571 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 PSTKQ8IV42 348 aaKnown RBP12.55□□□□□ -0.4
GCN1-204ENST00000548132 SLC35F3Q8IY50 421 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 NIPA2Q8N8Q9 360 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 PLA2G15Q8NCC3 412 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 SNIP1Q8TAD8 396 aaKnown RBP12.55□□□□□ -0.4
GCN1-204ENST00000548132 CXorf40AQ8TE69 158 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 SPOCK2Q92563 424 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 TBATAQ96M53 351 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 CSPG4P5Q96PW8 444 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 TUBGCP5Q96RT8 1024 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 NRSN2Q9GZP1 204 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 THAP2Q9H0W7 228 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 SUV39H2Q9H5I1 410 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 MYO1AQ9UBC5 1043 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 CLCA2Q9UQC9 943 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 ATP8A1Q9Y2Q0 1164 aa12.55□□□□□ -0.4
GCN1-204ENST00000548132 TTC24A2A3L6 582 aaPredicted RBP12.54□□□□□ -0.4
GCN1-204ENST00000548132 ARHGAP42A6NI28 874 aa12.54□□□□□ -0.4
GCN1-204ENST00000548132 DFFAO00273 331 aa12.54□□□□□ -0.4
GCN1-204ENST00000548132 NEMP1O14524 444 aa12.54□□□□□ -0.4
GCN1-204ENST00000548132 PRPSAP2O60256 369 aa12.54□□□□□ -0.4
GCN1-204ENST00000548132 TM7SF2O76062 418 aa12.54□□□□□ -0.4
GCN1-204ENST00000548132 GP1BAP07359 652 aa12.54□□□□□ -0.4
GCN1-204ENST00000548132 JUNDP17535 347 aa12.54□□□□□ -0.4
GCN1-204ENST00000548132 TGM2P21980 687 aa12.54□□□□□ -0.4
GCN1-204ENST00000548132 CSNK1DP48730 415 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms