RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 DTLQ9NZJ0 730 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 AMACRQ9UHK6 382 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 TFR2Q9UP52 801 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 REXO2Q9Y3B8 237 aaKnown RBP16.41■□□□□ 0.22
CIT-212ENST00000543239 HYOU1Q9Y4L1 999 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 A0A1B0GTQ1 180 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 A0A1W2PQ67 120 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 MED19A0JLT2 244 aaPredicted RBP16.4■□□□□ 0.22
CIT-212ENST00000543239 RCCD1A6NED2 376 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 IGLON5A6NGN9 336 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 TRAFD1O14545 582 aaPredicted RBP16.4■□□□□ 0.22
CIT-212ENST00000543239 APOL1O14791 398 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 MATN3O15232 486 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 FLRT2O43155 660 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 SOCS5O75159 536 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 ARRB1P49407 418 aaPredicted RBP16.4■□□□□ 0.22
CIT-212ENST00000543239 VAV2P52735 878 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 POLR2LP62875 67 aaKnown RBP16.4■□□□□ 0.22
CIT-212ENST00000543239 GBE1Q04446 702 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 FGL2Q14314 439 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 TMEM52BQ4KMG9 183 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 LRRC73Q5JTD7 316 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 ERAP2Q6P179 960 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 ABI3BPQ7Z7G0 1075 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 DAAM2Q86T65 1068 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 NAXDQ8IW45 347 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 TXLNBQ8N3L3 684 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 TPCN2Q8NHX9 752 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 CXorf40AQ8TE69 158 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 KLHDC7BQ96G42 594 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 MYOCQ99972 504 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 FZD3Q9NPG1 666 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 HS3ST3A1Q9Y663 406 aa16.4■□□□□ 0.22
CIT-212ENST00000543239 TP53BP1Q12888 1972 aaPredicted RBP16.39■□□□□ 0.21
CIT-212ENST00000543239 A6NNZ2 444 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 RIOK3O14730 519 aaKnown RBP16.39■□□□□ 0.21
CIT-212ENST00000543239 PJA2O43164 708 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 HTRA2O43464 458 aaPredicted RBP16.39■□□□□ 0.21
CIT-212ENST00000543239 SH3BP5O60239 455 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 MAP3K6O95382 1288 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 PAK4O96013 591 aaPredicted RBP16.39■□□□□ 0.21
CIT-212ENST00000543239 ADRB1P08588 477 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 THEGLP0DJG4 465 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 TNNT1P13805 278 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 KCNA4P22459 653 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 GSDMDP57764 484 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 SLC10A2Q12908 348 aaPredicted RBP16.39■□□□□ 0.21
CIT-212ENST00000543239 TAZQ16635 292 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 ALG1LQ6GMV1 187 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 KYAT3Q6YP21 454 aaKnown RBP16.39■□□□□ 0.21
CIT-212ENST00000543239 GCNT7Q6ZNI0 430 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 ZSWIM9Q86XI8 627 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 SPATS2Q86XZ4 545 aaKnown RBP16.39■□□□□ 0.21
CIT-212ENST00000543239 KATNAL2Q8IYT4 538 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 ACRBPQ8NEB7 543 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 RNF25Q96BH1 459 aaPredicted RBP16.39■□□□□ 0.21
CIT-212ENST00000543239 KLF6Q99612 283 aaPredicted RBP16.39■□□□□ 0.21
CIT-212ENST00000543239 C1QTNF7Q9BXJ2 289 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 POLR1EQ9GZS1 481 aaKnown RBP16.39■□□□□ 0.21
CIT-212ENST00000543239 GOLPH3Q9H4A6 298 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 PCDH12Q9NPG4 1184 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 SCUBE2Q9NQ36 999 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 SALL4Q9UJQ4 1053 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 CA5BQ9Y2D0 317 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 ATP8A1Q9Y2Q0 1164 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.39■□□□□ 0.21
CIT-212ENST00000543239 TMEM131Q92545 1883 aa16.39■□□□□ 0.21
CIT-212ENST00000543239 TRPM6Q9BX84 2022 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 CFAP69A5D8W1 941 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 KCNK3O14649 394 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 FPGTO14772 594 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 GIPC1O14908 333 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 TM7SF2O76062 418 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 CCNB1P14635 433 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 CES1P23141 567 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 MMP12P39900 470 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 CDKN2BP42772 138 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 RXRGP48443 463 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 PPIDQ08752 370 aaKnown RBP16.38■□□□□ 0.21
CIT-212ENST00000543239 TFDP2Q14188 446 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 INAVAQ3KP66 663 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 MFSD7Q6UXD7 560 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 RFX6Q8HWS3 928 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 DCP2Q8IU60 420 aaKnown RBP16.38■□□□□ 0.21
CIT-212ENST00000543239 CCDC13Q8IYE1 715 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 PAF1Q8N7H5 531 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 NSMCE3Q96MG7 304 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 LACRTQ9GZZ8 138 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 NOD2Q9HC29 1040 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 NT5MQ9NPB1 228 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 GPR27Q9NS67 375 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 HEY1Q9Y5J3 304 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 DOCK9Q9BZ29 2069 aa16.38■□□□□ 0.21
CIT-212ENST00000543239 SHROOM3Q8TF72 1996 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 RAD51BO15315 384 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 MMP20O60882 483 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 CBFA2T3O75081 653 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 NEBLO76041 1014 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 ZRANB2O95218 330 aaKnown RBP eCLIP16.37■□□□□ 0.21
CIT-212ENST00000543239 ITIH2P19823 946 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms