RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 NDUFAF2Q8N183 169 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 PGBD3Q8N328 593 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 HMGB4Q8WW32 186 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 ECHDC3Q96DC8 303 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 SNF8Q96H20 258 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 MRGPRX2Q96LB1 330 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 CKAP5Q14008 2032 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 PAPSS2O95340 614 aaPredicted RBP23.3■■□□□ 1.32
HOMER3-205ENST00000542541 APBB3O95704 486 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 NFKBIAP25963 317 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 KCTD19Q17RG1 926 aaPredicted RBP23.3■■□□□ 1.32
HOMER3-205ENST00000542541 TRIM31Q9BZY9 425 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 C2orf42Q9NWW7 574 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 CHKBQ9Y259 395 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 LOC285095A0A1B0GVY8 99 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 TSPAN11A1L157 253 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 SMAPO00193 183 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 FZD6O60353 706 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 NDUFV2P19404 249 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 TPSB2P20231 275 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 IVDP26440 423 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 MAGEA6P43360 314 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 EPHB1P54762 984 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 SARNPP82979 210 aaKnown RBP23.29■■□□□ 1.32
HOMER3-205ENST00000542541 TPSAB1Q15661 275 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 DUPD1Q68J44 220 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 ANO7Q6IWH7 933 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 KDELC2Q7Z4H8 507 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 PPIL6Q8IXY8 311 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 HHIPQ96QV1 700 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 HDAC8Q9BY41 377 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 PABPC3Q9H361 631 aaKnown RBP23.29■■□□□ 1.32
HOMER3-205ENST00000542541 PHTF1Q9UMS5 762 aa23.29■■□□□ 1.32
HOMER3-205ENST00000542541 C16orf96A6NNT2 1141 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 DNALI1O14645 258 aaPredicted RBP23.28■■□□□ 1.32
HOMER3-205ENST00000542541 MID1O15344 667 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 SUN1O94901 812 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 HEXIM1O94992 359 aaKnown RBP23.28■■□□□ 1.32
HOMER3-205ENST00000542541 NDST3O95803 873 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 ITIH2P19823 946 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 HLA-DPA1P20036 260 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 XPAP23025 273 aaPredicted RBP23.28■■□□□ 1.32
HOMER3-205ENST00000542541 SUOXP51687 545 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 DRG2P55039 364 aaKnown RBP23.28■■□□□ 1.32
HOMER3-205ENST00000542541 SLC7A5Q01650 507 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 CALCOCO2Q13137 446 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 POM121L1PQ3SYA9 428 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 FBXL19Q6PCT2 694 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 KIAA1324Q6UXG2 1013 aaKnown RBP23.28■■□□□ 1.32
HOMER3-205ENST00000542541 RANBP10Q6VN20 620 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 TMEM105Q8N8V8 129 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 CPT1BQ92523 772 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 RMDN1Q96DB5 314 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 TRIB3Q96RU7 358 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 OMDQ99983 421 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 TBL1YQ9BQ87 522 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 FICDQ9BVA6 458 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 NCKAP1Q9Y2A7 1128 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 SNX24Q9Y343 169 aa23.28■■□□□ 1.32
HOMER3-205ENST00000542541 CPP00450 1065 aa23.27■■□□□ 1.32
HOMER3-205ENST00000542541 ADRA1AP35348 466 aa23.27■■□□□ 1.32
HOMER3-205ENST00000542541 KCNJ11Q14654 390 aa23.27■■□□□ 1.32
HOMER3-205ENST00000542541 IZUMO3Q5VZ72 239 aa23.27■■□□□ 1.32
HOMER3-205ENST00000542541 ERN2Q76MJ5 926 aaKnown RBP23.27■■□□□ 1.32
HOMER3-205ENST00000542541 TTC7BQ86TV6 843 aa23.27■■□□□ 1.32
HOMER3-205ENST00000542541 KBTBD6Q86V97 674 aa23.27■■□□□ 1.32
HOMER3-205ENST00000542541 CACUL1Q86Y37 369 aa23.27■■□□□ 1.32
HOMER3-205ENST00000542541 LRRN4CLQ8ND94 238 aa23.27■■□□□ 1.32
HOMER3-205ENST00000542541 GANCQ8TET4 914 aa23.27■■□□□ 1.32
HOMER3-205ENST00000542541 SLC6A17Q9H1V8 727 aa23.27■■□□□ 1.32
HOMER3-205ENST00000542541 WHRNQ9P202 907 aa23.27■■□□□ 1.32
HOMER3-205ENST00000542541 EBF1Q9UH73 591 aa23.27■■□□□ 1.32
HOMER3-205ENST00000542541 ANKRD66B4E2M5 251 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 AP3B1O00203 1094 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 RIOK3O14730 519 aaKnown RBP23.26■■□□□ 1.31
HOMER3-205ENST00000542541 LAMTOR5O43504 91 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 AGTP01019 485 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 PRLP01236 227 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 PDHA1P08559 390 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 RPL21P46778 160 aaKnown RBP23.26■■□□□ 1.31
HOMER3-205ENST00000542541 GRIA4P48058 902 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 NEK3P51956 506 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 TERF1P54274 439 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 SPARCL1Q14515 664 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 MORF4L2Q15014 288 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 SLC1A5Q15758 541 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 UGP2Q16851 508 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 TEX35Q5T0J7 233 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 SYCP2LQ5T4T6 812 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 RNASEH2BQ5TBB1 312 aaKnown RBP23.26■■□□□ 1.31
HOMER3-205ENST00000542541 USP30Q70CQ3 517 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 HOOK3Q86VS8 718 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 RASSF3Q86WH2 238 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 HDDC3Q8N4P3 179 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 LPCAT1Q8NF37 534 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 PIH1D2Q8WWB5 315 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 RAB7BQ96AH8 199 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 ARRDC3Q96B67 414 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 DPH5Q9H2P9 285 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 FBXL12Q9NXK8 326 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms