RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 SCNM1Q9BWG6 230 aa14.41□□□□□ -0.1
LTBR-209ENST00000541102 ZFR2Q9UPR6 939 aaKnown RBP14.41□□□□□ -0.1
LTBR-209ENST00000541102 PCDHA3Q9Y5H8 950 aa14.41□□□□□ -0.1
LTBR-209ENST00000541102 FADS3Q9Y5Q0 445 aa14.41□□□□□ -0.1
LTBR-209ENST00000541102 INSIG1O15503 277 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 MFSD11O43934 449 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 PCDHGA12O60330 932 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 ITGAVP06756 1048 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 CTNNA2P26232 953 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 AKT2P31751 481 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 ABL2P42684 1182 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 CDKN2BP42772 138 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 GRK6P43250 576 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 CLDN2P57739 230 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 RPS21P63220 83 aaKnown RBP14.4□□□□□ -0.1
LTBR-209ENST00000541102 SHBQ15464 509 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 TAZQ16635 292 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 CCDC157Q569K6 752 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 LRRC73Q5JTD7 316 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 FAM182AQ5T1J6 154 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 NCBP2-AS2Q69YL0 99 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 SPOCD1Q6ZMY3 1216 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 PEX26Q7Z412 305 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 SLCO6A1Q86UG4 719 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 IQCHQ86VS3 1027 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 RNF157Q96PX1 679 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 CDC6Q99741 560 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 ZNF670Q9BS34 389 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 SLC17A9Q9BYT1 436 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 LHX3Q9UBR4 397 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 AMFRQ9UKV5 643 aa14.4□□□□□ -0.1
LTBR-209ENST00000541102 APOBEC2Q9Y235 224 aaKnown RBP14.4□□□□□ -0.1
LTBR-209ENST00000541102 TRPM6Q9BX84 2022 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 MAGEC1O60732 1142 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 PRAMEF11O60813 436 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 TRIM16O95361 564 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 PAK4O96013 591 aaPredicted RBP14.39□□□□□ -0.11
LTBR-209ENST00000541102 ATXN1LP0C7T5 689 aaKnown RBP14.39□□□□□ -0.11
LTBR-209ENST00000541102 THEGLP0DJG4 465 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 PYGMP11217 842 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 ARRB1P49407 418 aaPredicted RBP14.39□□□□□ -0.11
LTBR-209ENST00000541102 ZNF135P52742 658 aaPredicted RBP14.39□□□□□ -0.11
LTBR-209ENST00000541102 GBE1Q04446 702 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 OVGP1Q12889 678 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 BNIP3Q12983 259 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 SGCGQ13326 291 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 ZNF211Q13398 564 aaPredicted RBP14.39□□□□□ -0.11
LTBR-209ENST00000541102 IFI16Q16666 785 aaKnown RBP14.39□□□□□ -0.11
LTBR-209ENST00000541102 TMEM259Q4ZIN3 620 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 KIAA1161Q6NSJ0 714 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 TMCO3Q6UWJ1 677 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 NPNTQ6UXI9 565 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 TTC7BQ86TV6 843 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 PLD5Q8N7P1 536 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 TMEM145Q8NBT3 493 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 VOPP1Q96AW1 172 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 HES6Q96HZ4 224 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 CALR3Q96L12 384 aaKnown RBP14.39□□□□□ -0.11
LTBR-209ENST00000541102 OSBPL1AQ9BXW6 950 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 SP110Q9HB58 689 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 DDX56Q9NY93 547 aaKnown RBP14.39□□□□□ -0.11
LTBR-209ENST00000541102 RCOR3Q9P2K3 495 aaPredicted RBP14.39□□□□□ -0.11
LTBR-209ENST00000541102 GGT7Q9UJ14 662 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 KLK13Q9UKR3 277 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 WASF3Q9UPY6 502 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 ITM2BQ9Y287 266 aa14.39□□□□□ -0.11
LTBR-209ENST00000541102 IGLON5A6NGN9 336 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 TSPAN6O43657 245 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 AP1G1O43747 822 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 ZRANB2O95218 330 aaKnown RBP eCLIP14.38□□□□□ -0.115e-8■■■■■ 51.3
LTBR-209ENST00000541102 TIMP2P16035 220 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 ITIH2P19823 946 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 HNRNPA2B1P22626 353 aaKnown RBP14.38□□□□□ -0.11
LTBR-209ENST00000541102 XPAP23025 273 aaPredicted RBP14.38□□□□□ -0.11
LTBR-209ENST00000541102 DYNLT1P63172 113 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 INAVAQ3KP66 663 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 MEI1Q5TIA1 1274 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 KAZNQ674X7 775 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 B4GALNT4Q76KP1 1039 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 MAP7D3Q8IWC1 876 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 SYCE1Q8N0S2 351 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 EID2Q8N6I1 236 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 EXD1Q8NHP7 514 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 BAHD1Q8TBE0 780 aaPredicted RBP14.38□□□□□ -0.11
LTBR-209ENST00000541102 SAP25Q8TEE9 199 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 RAB7BQ96AH8 199 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 HEMGNQ9BXL5 484 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 ERVMER34-1Q9H9K5 563 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 PDFQ9HBH1 243 aa14.38□□□□□ -0.11
LTBR-209ENST00000541102 SAE1Q9UBE0 346 aaPredicted RBP14.38□□□□□ -0.11
LTBR-209ENST00000541102 MAP1BP46821 2468 aaKnown RBP14.38□□□□□ -0.11
LTBR-209ENST00000541102 EPG5Q9HCE0 2579 aa14.37□□□□□ -0.11
LTBR-209ENST00000541102 hCG_1818297A0A087WSY0 165 aa14.37□□□□□ -0.11
LTBR-209ENST00000541102 CCDC66A2RUB6 948 aa14.37□□□□□ -0.11
LTBR-209ENST00000541102 ZNF487B1APH4 448 aa14.37□□□□□ -0.11
LTBR-209ENST00000541102 RAD51BO15315 384 aa14.37□□□□□ -0.11
LTBR-209ENST00000541102 YKT6O15498 198 aa14.37□□□□□ -0.11
LTBR-209ENST00000541102 SDC3O75056 442 aa14.37□□□□□ -0.11
LTBR-209ENST00000541102 PIGNO95427 931 aa14.37□□□□□ -0.11
LTBR-209ENST00000541102 EPHA8P29322 1005 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms