RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 SLC27A1Q6PCB7 646 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 POTEHQ6S545 545 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 SCIMPQ6UWF3 145 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 DCBLD1Q8N8Z6 715 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 ZMIZ2Q8NF64 920 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 OR52K2Q8NGK3 314 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 HASPINQ8TF76 798 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 CYGBQ8WWM9 190 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 ZNF597Q96LX8 424 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 NSUN5Q96P11 429 aaKnown RBP10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 SMOQ99835 787 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 LTB4R2Q9NPC1 389 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 NCKIPSDQ9NZQ3 722 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 NDUFA13Q9P0J0 144 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 STAP1Q9ULZ2 295 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 BTRCQ9Y297 605 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 KCTD3Q9Y597 815 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 CSADQ9Y600 493 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 PIRO00625 290 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 TRIM24O15164 1050 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 GPC4O75487 556 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 ATE1O95260 518 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 ZNF23P17027 643 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 RPS12P25398 132 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 ARCN1P48444 511 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 SLC5A3P53794 718 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 CSE1LP55060 971 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 RHDQ02161 417 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 PLCL1Q15111 1095 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 PRAMEF19Q5SWL8 479 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 DENND5AQ6IQ26 1287 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 ELMSAN1Q6PJG2 1045 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 UNC93AQ86WB7 457 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 APOBEC3FQ8IUX4 373 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 FUNDC1Q8IVP5 155 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 DNAJB3Q8WWF6 145 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 NT5C3BQ969T7 300 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 HSFY1Q96LI6 401 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 COLEC11Q9BWP8 271 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 MRPL46Q9H2W6 279 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 IGSF5Q9NSI5 407 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 MPP6Q9NZW5 540 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 CPA4Q9UI42 421 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 FAF1Q9UNN5 650 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 MYRFQ9Y2G1 1151 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 CRYL1Q9Y2S2 319 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 PLXNA1Q9UIW2 1896 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 NME4O00746 187 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 SUPT7LO94864 414 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 STAU1O95793 577 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 CSRP3P50461 194 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 CACNB2Q08289 660 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 SEMA3BQ13214 749 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 GRB7Q14451 532 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 GEN1Q17RS7 908 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 FAM83EQ2M2I3 478 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 KIF19Q2TAC6 998 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 GPR158Q5T848 1215 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 KLC3Q6P597 504 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 TMEM207Q6UWW9 146 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 FASTKD5Q7L8L6 764 aaKnown RBP10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 SGCDQ92629 289 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 RANBP9Q96S59 729 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 WDCPQ9H6R7 721 aa10.43□□□□□ -0.74
CDC42SE1-207ENST00000540998 A0A1W2PPW3 197 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 PIRTP0C851 137 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 PRSS56P0CW18 603 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 NR4A1P22736 598 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 CASP2P42575 452 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 MAGEA10P43363 369 aaPredicted RBP10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 SLC26A2P50443 739 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 PLIN5Q00G26 463 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 NEDD8Q15843 81 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 FUT11Q495W5 492 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 GPR107Q5VW38 600 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 PKN3Q6P5Z2 889 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 TMEM26Q6ZUK4 368 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 TAC4Q86UU9 113 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 EXOC8Q8IYI6 725 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 SCAMP5Q8TAC9 235 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 C12orf43Q96C57 262 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 PCED1BQ96HM7 432 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 TBL1YQ9BQ87 522 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 UNC93B1Q9H1C4 597 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 ADAMTS10Q9H324 1103 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 ARMC7Q9H6L4 198 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 SPAG4Q9NPE6 437 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 RRN3Q9NYV6 651 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 LOC285556D6RIA3 1793 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 LTBP3Q9NS15 1303 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 H3BMM5 538 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 J3QRK9 145 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 KPNA6O60684 536 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 HLA-DQB2P05538 268 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 C8BP07358 591 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 CPB1P15086 417 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 ACADSBP45954 432 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 TAF6P49848 677 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 CLCN2P51788 898 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 SNX16P57768 344 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms