RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 PIGHQ14442 188 aaPredicted RBP16.94■□□□□ 0.3
DDB1-215ENST00000539712 UGP2Q16851 508 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 ALKBH5Q6P6C2 394 aaKnown RBP16.94■□□□□ 0.3
DDB1-215ENST00000539712 SRLQ86TD4 932 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 TMPRSS12Q86WS5 348 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 CPNE8Q86YQ8 564 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 TP53I13Q8NBR0 393 aaPredicted RBP16.94■□□□□ 0.3
DDB1-215ENST00000539712 MDM1Q8TC05 714 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 IQCDQ96DY2 449 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 ZNF641Q96N77 438 aaPredicted RBP16.94■□□□□ 0.3
DDB1-215ENST00000539712 CSPG4P5Q96PW8 444 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 WRAP53Q9BUR4 548 aaKnown RBP16.94■□□□□ 0.3
DDB1-215ENST00000539712 NUP85Q9BW27 656 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 PCDH12Q9NPG4 1184 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 IPO11Q9UI26 975 aaKnown RBP16.94■□□□□ 0.3
DDB1-215ENST00000539712 U3KQA8 63 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 LRRK1Q38SD2 2015 aa16.93■□□□□ 0.3
DDB1-215ENST00000539712 TRABD2BA6NFA1 517 aa16.93■□□□□ 0.3
DDB1-215ENST00000539712 DFFAO00273 331 aa16.93■□□□□ 0.3
DDB1-215ENST00000539712 PALMO75781 387 aa16.93■□□□□ 0.3
DDB1-215ENST00000539712 SUOXP51687 545 aa16.93■□□□□ 0.3
DDB1-215ENST00000539712 NSUN2Q08J23 767 aaKnown RBP eCLIP16.93■□□□□ 0.3
DDB1-215ENST00000539712 SLC10A7Q0GE19 358 aa16.93■□□□□ 0.3
DDB1-215ENST00000539712 PDE1CQ14123 709 aaPredicted RBP16.93■□□□□ 0.3
DDB1-215ENST00000539712 VPS36Q86VN1 386 aa16.93■□□□□ 0.3
DDB1-215ENST00000539712 FAM71BQ8TC56 605 aa16.93■□□□□ 0.3
DDB1-215ENST00000539712 HSPH1Q92598 858 aa16.93■□□□□ 0.3
DDB1-215ENST00000539712 ECHDC3Q96DC8 303 aa16.93■□□□□ 0.3
DDB1-215ENST00000539712 PSKH2Q96QS6 385 aa16.93■□□□□ 0.3
DDB1-215ENST00000539712 TUBGCP5Q96RT8 1024 aa16.93■□□□□ 0.3
DDB1-215ENST00000539712 ZWILCHQ9H900 591 aa16.93■□□□□ 0.3
DDB1-215ENST00000539712 PCDH18Q9HCL0 1135 aa16.93■□□□□ 0.3
DDB1-215ENST00000539712 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.93■□□□□ 0.3
DDB1-215ENST00000539712 DNAJC28Q9NX36 388 aa16.93■□□□□ 0.3
DDB1-215ENST00000539712 DKK4Q9UBT3 224 aa16.93■□□□□ 0.3
DDB1-215ENST00000539712 H3BRJ5 948 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 TRAFD1O14545 582 aaPredicted RBP16.92■□□□□ 0.3
DDB1-215ENST00000539712 RIOK3O14730 519 aaKnown RBP16.92■□□□□ 0.3
DDB1-215ENST00000539712 SCAMP1O15126 338 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 FFAR2O15552 330 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 NEBLO76041 1014 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 TM7SF2O76062 418 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 CDK4P11802 303 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 MYF5P13349 255 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 PTMSP20962 102 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 EIF4A3P38919 411 aaKnown RBP16.92■□□□□ 0.3
DDB1-215ENST00000539712 ARSEP51690 589 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 SEMG2Q02383 582 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 ILKQ13418 452 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 RFTN1Q14699 578 aaPredicted RBP16.92■□□□□ 0.3
DDB1-215ENST00000539712 GRM3Q14832 879 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 ASTE1Q2TB18 679 aaPredicted RBP16.92■□□□□ 0.3
DDB1-215ENST00000539712 CCDC122Q5T0U0 273 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 PARGQ86W56 976 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 LZTR1Q8N653 840 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 ZNF548Q8NEK5 533 aaPredicted RBP16.92■□□□□ 0.3
DDB1-215ENST00000539712 TEKT4Q8WW24 435 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 CCDC86Q9H6F5 360 aaKnown RBP16.92■□□□□ 0.3
DDB1-215ENST00000539712 IP6K2Q9UHH9 426 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 ANAPC7Q9UJX3 599 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 COQ6Q9Y2Z9 468 aa16.92■□□□□ 0.3
DDB1-215ENST00000539712 TTC24A2A3L6 582 aaPredicted RBP16.91■□□□□ 0.3
DDB1-215ENST00000539712 K7ESM1 405 aa16.91■□□□□ 0.3
DDB1-215ENST00000539712 MAFKO60675 156 aa16.91■□□□□ 0.3
DDB1-215ENST00000539712 PRKCGP05129 697 aa16.91■□□□□ 0.3
DDB1-215ENST00000539712 CD48P09326 243 aa16.91■□□□□ 0.3
DDB1-215ENST00000539712 MMP12P39900 470 aa16.91■□□□□ 0.3
DDB1-215ENST00000539712 HNRNPKP61978 463 aaKnown RBP eCLIP16.91■□□□□ 0.3
DDB1-215ENST00000539712 NFKBIBQ15653 356 aa16.91■□□□□ 0.3
DDB1-215ENST00000539712 WSCD2Q2TBF2 565 aa16.91■□□□□ 0.3
DDB1-215ENST00000539712 BRAT1Q6PJG6 821 aa16.91■□□□□ 0.3
DDB1-215ENST00000539712 PGBD5Q8N414 524 aa16.91■□□□□ 0.3
DDB1-215ENST00000539712 FAM181AQ8N9Y4 354 aa16.91■□□□□ 0.3
DDB1-215ENST00000539712 CXorf40AQ8TE69 158 aa16.91■□□□□ 0.3
DDB1-215ENST00000539712 RFFLQ8WZ73 363 aa16.91■□□□□ 0.3
DDB1-215ENST00000539712 DNAJC7Q99615 494 aa16.91■□□□□ 0.3
DDB1-215ENST00000539712 TCEAL2Q9H3H9 227 aaPredicted RBP16.91■□□□□ 0.3
DDB1-215ENST00000539712 SP110Q9HB58 689 aa16.91■□□□□ 0.3
DDB1-215ENST00000539712 NLGN3Q9NZ94 848 aa16.91■□□□□ 0.3
DDB1-215ENST00000539712 RALYQ9UKM9 306 aaKnown RBP16.91■□□□□ 0.3
DDB1-215ENST00000539712 ASXL3Q9C0F0 2248 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 CKMT1AP12532 417 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 C6P13671 934 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 GM2AP17900 193 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 CR2P20023 1033 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 ARL4AP40617 200 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 LIG3P49916 1009 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 YPEL5P62699 121 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 INSM1Q01101 510 aaPredicted RBP16.9■□□□□ 0.3
DDB1-215ENST00000539712 CYP4F3Q08477 520 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 ELP6Q0PNE2 266 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 RALGDSQ12967 914 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 TARDBPQ13148 414 aaKnown RBP eCLIP16.9■□□□□ 0.3
DDB1-215ENST00000539712 MMRN1Q13201 1228 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 LBRQ14739 615 aaKnown RBP16.9■□□□□ 0.3
DDB1-215ENST00000539712 AGERQ15109 404 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 IRF4Q15306 451 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 SKOR2Q2VWA4 1001 aaPredicted RBP16.9■□□□□ 0.3
DDB1-215ENST00000539712 ATP13A4Q4VNC1 1196 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 HES3Q5TGS1 186 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms