RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 BIRC7Q96CA5 298 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 TRIM44Q96DX7 344 aaPredicted RBP12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 IMP4Q96G21 291 aaKnown RBP12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 RBM15Q96T37 977 aaKnown RBP eCLIP12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 VAT1Q99536 393 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 NAPGQ99747 312 aaPredicted RBP12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 SLC25A51Q9H1U9 297 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 KDM4CQ9H3R0 1056 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 SMARCAL1Q9NZC9 954 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 GGT7Q9UJ14 662 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 RAI2Q9Y5P3 530 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 RALGAPA1Q6GYQ0 2036 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 ATXN2Q99700 1313 aaKnown RBP12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 UPK3BL1B0FP48 263 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 UPK3BL2E5RIL1 263 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 F5H423 210 aaPredicted RBP12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 AREL1O15033 823 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 ZNF185O15231 689 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 FANCGO15287 622 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 AP1G1O43747 822 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 FZD6O60353 706 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 RNGTTO60942 597 aaKnown RBP12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 PCDH8O95206 1070 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 EPN2O95208 641 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 PGLSO95336 258 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 CPP00450 1065 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 IGHV4-34P06331 123 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 PDHA1P08559 390 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 SERPINF2P08697 491 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 XPAP23025 273 aaPredicted RBP12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 ITPKAP23677 461 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 MAOBP27338 520 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 SEMG2Q02383 582 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 CREB5Q02930 508 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 OASLQ15646 514 aaKnown RBP12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 UGP2Q16851 508 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 HS1BP3Q53T59 392 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 ANKRD20A2Q5SQ80 823 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 ANKRD20A1Q5TYW2 823 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 ANKRD20A3Q5VUR7 823 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 PAPD7Q5XG87 772 aaKnown RBP12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 BRAT1Q6PJG6 821 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 ASCL5Q7RTU5 278 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 RGL4Q8IZJ4 473 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 SPATA22Q8NHS9 363 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 CCDC110Q8TBZ0 833 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 SNX19Q92543 992 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 FOXJ1Q92949 421 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 LOXL4Q96JB6 756 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 FERMT1Q9BQL6 677 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 TMEM121Q9BTD3 319 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 TDRD1Q9BXT4 1180 aaKnown RBP12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 FRMD8P1Q9BZ68 369 aaPredicted RBP12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 PCED1AQ9H1Q7 454 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 ARRDC1-AS1Q9H2J1 176 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 EBF2Q9HAK2 575 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 PREBQ9HCU5 417 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 PCDH12Q9NPG4 1184 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 RSPH14Q9UHP6 348 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 TRHDEQ9UKU6 1024 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 ZFR2Q9UPR6 939 aaKnown RBP12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 CHKBQ9Y259 395 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 PCDHB9Q9Y5E1 797 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 MUC6Q6W4X9 2439 aa12.81□□□□□ -0.36
TSPAN9-207ENST00000539631 TP53BP1Q12888 1972 aaPredicted RBP12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 USP34Q70CQ2 3546 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 A0A1W2PQ67 120 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 A0A1W2PQU0 124 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 CTAGE9A4FU28 777 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 CES2O00748 559 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 STK10O94804 968 aaKnown RBP12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 MT-CYBP00156 380 aaPredicted RBP12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 TCP1P17987 556 aaKnown RBP12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 MAT2AP31153 395 aaKnown RBP12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 CCR5P51681 352 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 GDF10P55107 478 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 PTPRRQ15256 657 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 CCDC6Q16204 474 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 PCSK7Q16549 785 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 CCNG2Q16589 344 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 SYCP2LQ5T4T6 812 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 ARMC12Q5T9G4 340 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 CYP2U1Q7Z449 544 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 TRIM69Q86WT6 500 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 FAM71DQ8N9W8 422 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 DNASE2BQ8WZ79 361 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 PIGKQ92643 395 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 KLK6Q92876 244 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 TADA1Q96BN2 335 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 FCRL5Q96RD9 977 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 PCDH9Q9HC56 1237 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 TMEM74BQ9NUR3 256 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 UBP1Q9NZI7 540 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 NCDNQ9UBB6 729 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 EIF2B4Q9UI10 523 aaKnown RBP12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 GMEB2Q9UKD1 530 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 TTC7AQ9ULT0 858 aaPredicted RBP12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 PHTF1Q9UMS5 762 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 ZKSCAN5Q9Y2L8 839 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms