RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 ELP6Q0PNE2 266 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 CCDC142Q17RM4 750 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 FGD3Q5JSP0 725 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 FNBP1LQ5T0N5 605 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 RNF44Q7L0R7 432 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 ATL1Q8WXF7 558 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 IRGQQ8WZA9 623 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 GTPBP2Q9BX10 602 aaKnown RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 TLR10Q9BXR5 811 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 TCF7L2Q9NQB0 619 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 WRAP73Q9P2S5 460 aaPredicted RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 GMEB2Q9UKD1 530 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 NR2E1Q9Y466 385 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 MORC2Q9Y6X9 1032 aaPredicted RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 ARFGEF2Q9Y6D5 1785 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 NPEPPSL1A6NEC2 478 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 SGTAO43765 313 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 FAM153BP0C7A2 387 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 ADRA1DP25100 572 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 AIF1P55008 147 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 GNA13Q14344 377 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 MEA1Q16626 185 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 FAM153CQ494X1 144 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 GPAT3Q53EU6 434 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 SCIMPQ6UWF3 145 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 PLEKHM3Q6ZWE6 761 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 UBE2R2Q712K3 238 aaPredicted RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 PYROXD2Q8N2H3 581 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 KLHL23Q8NBE8 558 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 C2orf15Q8WU43 125 aaKnown RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 LMLNQ96KR4 655 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 PCDHB18PQ96TA0 734 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 SEPHS2Q99611 448 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 COPS8Q99627 209 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 TBCDQ9BTW9 1192 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 BCAS3Q9H6U6 928 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 ATP6V1HQ9UI12 483 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 PSMD13Q9UNM6 376 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 CCT8L1PA6NM43 557 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 ONECUT3O60422 494 aaPredicted RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 FGF18O76093 207 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 FGF1P05230 155 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 TCF3P15923 654 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 S100A3P33764 101 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 CLK3P49761 638 aaKnown RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 CLCN5P51795 746 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 IRX1P78414 480 aaPredicted RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 SEMG2Q02383 582 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 DSC2Q02487 901 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 CSTF3Q12996 717 aaKnown RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 CERCAMQ5T4B2 595 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 ATXN7L2Q5T6C5 722 aaPredicted RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 WLSQ5T9L3 541 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 FAM180AQ6UWF9 173 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 STRADAQ7RTN6 431 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 GRASPQ7Z6J2 395 aaPredicted RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 HID1Q8IV36 788 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 C12orf56Q8IXR9 622 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 OR52K2Q8NGK3 314 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 CYB5D2Q8WUJ1 264 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 KCTD4Q8WVF5 259 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 UBE2E3Q969T4 207 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 P2RY11Q96G91 374 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 FEM1CQ96JP0 617 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 OSBPL10Q9BXB5 764 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 COMMD8Q9NX08 183 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 OSER1Q9NX31 292 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 BTRCQ9Y297 605 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 NDUFAF1Q9Y375 327 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 Q9Y3F1 56 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 TNPO3Q9Y5L0 923 aaKnown RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 SNX13Q9Y5W8 968 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 KRT33AO76009 404 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 OR6A2O95222 327 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 GNSP15586 552 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 RFC2P35250 354 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 DNAJB7Q7Z6W7 309 aaPredicted RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 RBFAQ8N0V3 343 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 CLEC4CQ8WTT0 213 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 KLHL32Q96NJ5 620 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 TRMT61BQ9BVS5 477 aaKnown RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 SLC39A8Q9C0K1 460 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 CCDC167Q9P0B6 97 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 DMGDHQ9UI17 866 aaKnown RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 ERVW-1Q9UQF0 538 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 PRKAB1Q9Y478 270 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 PIAS1O75925 651 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 BMP6P22004 513 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 ADRA1BP35368 520 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 CSKP41240 450 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 MAGEA9P43362 315 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 GSSP48637 474 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 TRIM32Q13049 653 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 KDM7AQ6ZMT4 941 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 GPR135Q8IZ08 494 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 ATG16L2Q8NAA4 619 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 TRIB2Q92519 343 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 PPP1R14AQ96A00 147 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 PWWP2AQ96N64 755 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms