RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 ZNF385DQ9H6B1 395 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 RPAP3Q9H6T3 665 aaPredicted RBP10.78□□□□□ -0.68
RTN3-208ENST00000537981 TLR9Q9NR96 1032 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 PAQR5Q9NXK6 330 aaPredicted RBP10.78□□□□□ -0.68
RTN3-208ENST00000537981 MAT2BQ9NZL9 334 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 EGFL7Q9UHF1 273 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 DICER1Q9UPY3 1922 aaKnown RBP10.77□□□□□ -0.68
RTN3-208ENST00000537981 C12orf71A8MTZ7 269 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 A8MUA0 341 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 TSPAN9O75954 239 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 CAPN1P07384 714 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 IL4RP24394 825 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 TTKP33981 857 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 WNT7BP56706 349 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 MRPS15P82914 257 aaKnown RBP10.77□□□□□ -0.69
RTN3-208ENST00000537981 SNTA1Q13424 505 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 IMPG1Q17R60 797 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 PYCR3Q53H96 274 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 SV2AQ7L0J3 742 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 SLC51BQ86UW2 128 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 AMIGO3Q86WK7 504 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 MFSD2AQ8NA29 543 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 XXYLT1Q8NBI6 393 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 OR6F1Q8NGZ6 308 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 MAGEE2Q8TD90 523 aaPredicted RBP10.77□□□□□ -0.69
RTN3-208ENST00000537981 CELF1Q92879 486 aaKnown RBP10.77□□□□□ -0.69
RTN3-208ENST00000537981 CLP1Q92989 425 aaKnown RBP10.77□□□□□ -0.69
RTN3-208ENST00000537981 NECTIN4Q96NY8 510 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 IDI2Q9BXS1 227 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 PNPLA8Q9NP80 782 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 PCSK1NQ9UHG2 260 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 PNMA8BQ9ULN7 279 aaPredicted RBP10.77□□□□□ -0.69
RTN3-208ENST00000537981 SATB2Q9UPW6 733 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 ZNF652Q9Y2D9 606 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 MAGED1Q9Y5V3 778 aaPredicted RBP10.77□□□□□ -0.69
RTN3-208ENST00000537981 TMEM191CA6NGB0 347 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 TRIM24O15164 1050 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 RAD51BO15315 384 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 ZW10O43264 779 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 FKBP9O95302 570 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 BMP2P12643 396 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 CTRB1P17538 263 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 RPL17P18621 184 aaKnown RBP10.77□□□□□ -0.69
RTN3-208ENST00000537981 IL1RL1Q01638 556 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 POU6F1Q14863 301 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 HERC3Q15034 1050 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 CDK10Q15131 360 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 SNRNP35Q16560 246 aaKnown RBP10.77□□□□□ -0.69
RTN3-208ENST00000537981 CTRB2Q6GPI1 263 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 ERMP1Q7Z2K6 904 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 APPL2Q8NEU8 664 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 SPATA18Q8TC71 538 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 SDCCAG3Q96C92 435 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 CNDP1Q96KN2 507 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 FERD3LQ96RJ6 166 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 ZNF577Q9BSK1 485 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 ZBTB26Q9HCK0 441 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 NDFIP2Q9NV92 336 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 MTMR4Q9NYA4 1195 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 PKD2L2Q9NZM6 624 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 LUZP4Q9P127 313 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 MINPP1Q9UNW1 487 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 PCDHB12Q9Y5F1 795 aa10.77□□□□□ -0.69
RTN3-208ENST00000537981 FAM159BA6NKW6 160 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 GRID2O43424 1007 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 UGT2B11O75310 529 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 STAM2O75886 525 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 MSL3P1P0C860 447 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 DBTP11182 482 aaKnown RBP10.76□□□□□ -0.69
RTN3-208ENST00000537981 PRKACAP17612 351 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 HTR2BP41595 481 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 ARCN1P48444 511 aaKnown RBP10.76□□□□□ -0.69
RTN3-208ENST00000537981 MASP1P48740 699 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 GTF2A2P52657 109 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 STX1BP61266 288 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 TFAMQ00059 246 aaKnown RBP10.76□□□□□ -0.69
RTN3-208ENST00000537981 PRKCEQ02156 737 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 ZNF543Q08ER8 600 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 KRT39Q6A163 491 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 ZNF773Q6PK81 442 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 CES3Q6UWW8 571 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 ZNF534Q76KX8 674 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 R3HCC1LQ7Z5L2 792 aaKnown RBP10.76□□□□□ -0.69
RTN3-208ENST00000537981 FAM35AQ86V20 835 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 SPPL2CQ8IUH8 684 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 CCDC28AQ8IWP9 274 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 GALNT12Q8IXK2 581 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 TERB1Q8NA31 727 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 C7orf57Q8NEG2 295 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 RELTQ969Z4 430 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 SLC45A3Q96JT2 553 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 NELL2Q99435 816 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 OR2B2Q9GZK3 357 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 EFCAB1Q9HAE3 211 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 XPNPEP3Q9NQH7 507 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 EXD2Q9NVH0 621 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 ZDHHC2Q9UIJ5 367 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 DNMT3LQ9UJW3 386 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 ACAD8Q9UKU7 415 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 MAFFQ9ULX9 164 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms