RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 GPC3P51654 580 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 ARFIP2P53365 341 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 LLGL1Q15334 1064 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 SAFBQ15424 915 aaKnown RBP eCLIP6.92□□□□□ -1.3
CCDC60-203ENST00000536742 TEAD2Q15562 447 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 HLA-BQ31612 363 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 WDR45BQ5MNZ6 344 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 FAM160B1Q5W0V3 765 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 CRIP3Q6Q6R5 217 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 DEFB119Q8N690 84 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 TRIML1Q8N9V2 468 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 CNNM3Q8NE01 707 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 TMIEQ8NEW7 156 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 ZNF564Q8TBZ8 553 aaPredicted RBP6.92□□□□□ -1.3
CCDC60-203ENST00000536742 PIGOQ8TEQ8 1089 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 ZNF503Q96F45 646 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 APIPQ96GX9 242 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 SORCS2Q96PQ0 1159 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 PLEKHG4BQ96PX9 1271 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 MMS19Q96T76 1030 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 SMOQ99835 787 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 TRIM54Q9BYV2 358 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 GCOM2Q9BZD3 368 aaPredicted RBP6.92□□□□□ -1.3
CCDC60-203ENST00000536742 NUP62CLQ9H1M0 184 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 CPVLQ9H3G5 476 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 IL21RQ9HBE5 538 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 ARNT2Q9HBZ2 717 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 FBRSL1Q9HCM7 1045 aaKnown RBP6.92□□□□□ -1.3
CCDC60-203ENST00000536742 SLAMF7Q9NQ25 335 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 AKIP1Q9NQ31 210 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 ASAH2Q9NR71 780 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 BTBD3Q9Y2F9 522 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.92□□□□□ -1.3
CCDC60-203ENST00000536742 KIAA1549LQ6ZVL6 1849 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 PCSK5Q92824 1860 aa6.92□□□□□ -1.3
CCDC60-203ENST00000536742 NBEAL1Q6ZS30 2694 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 MYO1FO00160 1098 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 PRRG1O14668 218 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 ZNF185O15231 689 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 ADAM12O43184 909 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 MYL4P12829 197 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 PEX2P28328 305 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 ADRA1BP35368 520 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 ZNF135P52742 658 aaPredicted RBP6.91□□□□□ -1.3
CCDC60-203ENST00000536742 ACTR2P61160 394 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 OCA2Q04671 838 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 ELAVL2Q12926 359 aaKnown RBP6.91□□□□□ -1.3
CCDC60-203ENST00000536742 GALEQ14376 348 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 BEAN1Q3B7T3 259 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 FAM171A1Q5VUB5 890 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 APOA5Q6Q788 366 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 ZNF783Q6ZMS7 281 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 CFAP52Q8N1V2 620 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 TMEM132CQ8N3T6 1108 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 OR6B3Q8NGW1 331 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 SPATA3Q8NHX4 192 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 ZNF461Q8TAF7 563 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 SSH3Q8TE77 659 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 MARS2Q96GW9 593 aaKnown RBP6.91□□□□□ -1.3
CCDC60-203ENST00000536742 LRRC3BQ96PB8 259 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 MOGAT1Q96PD6 335 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 IMPG2Q9BZV3 1241 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 API5Q9BZZ5 524 aaKnown RBP6.91□□□□□ -1.3
CCDC60-203ENST00000536742 TINAGL1Q9GZM7 467 aaPredicted RBP6.91□□□□□ -1.3
CCDC60-203ENST00000536742 THSD1Q9NS62 852 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 GKN1Q9NS71 199 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 DONSONQ9NYP3 566 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 NOX1Q9Y5S8 564 aa6.91□□□□□ -1.3
CCDC60-203ENST00000536742 A0A1W2PS29 197 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 IPO5O00410 1097 aaKnown RBP6.9□□□□□ -1.3
CCDC60-203ENST00000536742 CYR61O00622 381 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 PRSS23O95084 383 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 GJA1P17302 382 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 SLC7A1P30825 629 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 CLCN3P51790 818 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 PSMC1P62191 440 aaKnown RBP6.9□□□□□ -1.3
CCDC60-203ENST00000536742 ASIC1P78348 528 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 TUBA3CQ13748 450 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 ALDH1L2Q3SY69 923 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 SWSAP1Q6NVH7 229 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 TUBA3EQ6PEY2 450 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 PPP1R32Q7Z5V6 425 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 USP37Q86T82 979 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 ERC1Q8IUD2 1116 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 PDPRQ8NCN5 879 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 HAS1Q92839 578 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 CD101Q93033 1021 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 FUBP1Q96AE4 644 aaKnown RBP6.9□□□□□ -1.3
CCDC60-203ENST00000536742 CHFRQ96EP1 664 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 ZNF419Q96HQ0 510 aaPredicted RBP6.9□□□□□ -1.3
CCDC60-203ENST00000536742 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.9□□□□□ -1.3
CCDC60-203ENST00000536742 SCAND2PQ9GZW5 306 aaPredicted RBP6.9□□□□□ -1.3
CCDC60-203ENST00000536742 NAPBQ9H115 298 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 JMJD4Q9H9V9 463 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 VAT1LQ9HCJ6 419 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 TBX20Q9UMR3 447 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 PHTF1Q9UMS5 762 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 SLC45A2Q9UMX9 530 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 NFE2L3Q9Y4A8 694 aa6.9□□□□□ -1.3
CCDC60-203ENST00000536742 CDY1Q9Y6F8 540 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms