RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 OXR1Q8N573 874 aa18.07■□□□□ 0.48
TNFRSF1A-209ENST00000536717 LZTR1Q8N653 840 aa18.07■□□□□ 0.48
TNFRSF1A-209ENST00000536717 TSEN2Q8NCE0 465 aaKnown RBP18.07■□□□□ 0.48
TNFRSF1A-209ENST00000536717 TSC1Q92574 1164 aa18.07■□□□□ 0.48
TNFRSF1A-209ENST00000536717 BMFQ96LC9 184 aa18.07■□□□□ 0.48
TNFRSF1A-209ENST00000536717 CDC6Q99741 560 aa18.07■□□□□ 0.48
TNFRSF1A-209ENST00000536717 SP110Q9HB58 689 aa18.07■□□□□ 0.48
TNFRSF1A-209ENST00000536717 DKK3Q9UBP4 350 aa18.07■□□□□ 0.48
TNFRSF1A-209ENST00000536717 TRIM10Q9UDY6 481 aa18.07■□□□□ 0.48
TNFRSF1A-209ENST00000536717 SALL4Q9UJQ4 1053 aa18.07■□□□□ 0.48
TNFRSF1A-209ENST00000536717 A0A0U1RQJ8 604 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 IGLON5A6NGN9 336 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 ZSCAN12O43309 604 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 PALMO75781 387 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 ATXN1LP0C7T5 689 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 ITIH2P19823 946 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 SLC1A1P43005 524 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 IL10RBQ08334 325 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 HADHQ16836 314 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 KANSL1Q7Z3B3 1105 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 TTC7BQ86TV6 843 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 SLC22A18ASQ8N1D0 253 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 RNF10Q8N5U6 811 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 OR13H1Q8NG92 308 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 TPCN2Q8NHX9 752 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 ADAMTS14Q8WXS8 1223 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 KLF6Q99612 283 aaPredicted RBP18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 C1QTNF2Q9BXJ5 285 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 TMEM121BQ9BXQ6 578 aaPredicted RBP18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 IPO11Q9UI26 975 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 KLK13Q9UKR3 277 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 GUCA1BQ9UMX6 200 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 HS3ST3A1Q9Y663 406 aa18.06■□□□□ 0.48
TNFRSF1A-209ENST00000536717 POM121BA6NF01 834 aa18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 NEMP1O14524 444 aa18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 BUB1BO60566 1050 aaPredicted RBP18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 DKK1O94907 266 aa18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 ITGAVP06756 1048 aa18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 TIMP2P16035 220 aa18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 IL4RP24394 825 aa18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 C11orf63Q6NUN7 778 aa18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 TMCO3Q6UWJ1 677 aa18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 DAAM2Q86T65 1068 aa18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 ZSCAN30Q86W11 494 aa18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 FAM71BQ8TC56 605 aa18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 LZTFL1Q9NQ48 299 aa18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 GPR27Q9NS67 375 aa18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 APOBEC2Q9Y235 224 aaKnown RBP18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 MYLKQ15746 1914 aa18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 KMT2BQ9UMN6 2715 aaPredicted RBP18.05■□□□□ 0.48
TNFRSF1A-209ENST00000536717 TSPAN11A1L157 253 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 MUSKO15146 869 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 CD48P09326 243 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 CSNK1DP48730 415 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 ARSEP51690 589 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 CDH6P55285 790 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 MMRN1Q13201 1228 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 GRM3Q14832 879 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 INAVAQ3KP66 663 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 ATP13A4Q4VNC1 1196 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 HCAR2Q8TDS4 363 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 ASB12Q8WXK4 309 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 LENG8Q96PV6 779 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 CALN1Q9BXU9 219 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 SUV39H2Q9H5I1 410 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 CAAP1Q9H8G2 361 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 NEUROG3Q9Y4Z2 214 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 FREM2Q5SZK8 3169 aa18.04■□□□□ 0.48
TNFRSF1A-209ENST00000536717 A6NNZ2 444 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 TNFSF14O43557 240 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 SPOPO43791 374 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 PEX11BO96011 259 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 COMTP21964 271 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 TAS2R40P59535 323 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 SLC10A7Q0GE19 358 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 RFTN1Q14699 578 aaPredicted RBP18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 KYAT3Q6YP21 454 aaKnown RBP18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 Q6ZSR6 202 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 SRLQ86TD4 932 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 ZSWIM9Q86XI8 627 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 CAMK1DQ8IU85 385 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 FAM174AQ8TBP5 190 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 KIAA1524Q8TCG1 905 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 GATA6Q92908 595 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 NSMCE3Q96MG7 304 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 TUBGCP5Q96RT8 1024 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 CINPQ9BW66 212 aaPredicted RBP18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 KLHL11Q9NVR0 708 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 ALG6Q9Y672 507 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 FAM221BA6H8Z2 402 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 C1QTNF9BB2RNN3 333 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 SDC3O75056 442 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 C1QTNF9P0C862 333 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 NSUN2Q08J23 767 aaKnown RBP eCLIP18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 SGCGQ13326 291 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 KRT81Q14533 505 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 LBRQ14739 615 aaKnown RBP18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 UGP2Q16851 508 aa18.03■□□□□ 0.48
TNFRSF1A-209ENST00000536717 KDM7AQ6ZMT4 941 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms