RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ABI3BPQ7Z7G0 1075 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 IQCHQ86VS3 1027 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 TMTC1Q8IUR5 882 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 MAP7D3Q8IWC1 876 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 TEX26Q8N6G2 289 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 SETD7Q8WTS6 366 aaKnown RBP13.28□□□□□ -0.28
PRKDC-206ENST00000536429 ECHDC3Q96DC8 303 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 ZNF641Q96N77 438 aaPredicted RBP13.28□□□□□ -0.28
PRKDC-206ENST00000536429 TUBGCP5Q96RT8 1024 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 MGME1Q9BQP7 344 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 SLC32A1Q9H598 525 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 ATP13A3Q9H7F0 1226 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 NOD2Q9HC29 1040 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 NT5MQ9NPB1 228 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 DTLQ9NZJ0 730 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 COQ6Q9Y2Z9 468 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 PCDHGC4Q9Y5F7 938 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 PCDHGB2Q9Y5G2 931 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 ALG6Q9Y672 507 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 CEP295Q9C0D2 2601 aa13.27□□□□□ -0.28
PRKDC-206ENST00000536429 RIOK3O14730 519 aaKnown RBP13.27□□□□□ -0.29
PRKDC-206ENST00000536429 SPOPO43791 374 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 XPAP23025 273 aaPredicted RBP13.27□□□□□ -0.29
PRKDC-206ENST00000536429 PMLP29590 882 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 SERPINA4P29622 427 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 CDC25BP30305 580 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 MMP13P45452 471 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 RENBPP51606 427 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 AP1S1P61966 158 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 BCL2L1Q07817 233 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 TRAF2Q12933 501 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 BNIP3Q12983 259 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 SGCGQ13326 291 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 GRM3Q14832 879 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 PTPRRQ15256 657 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 TMEM52BQ4KMG9 183 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 SLC45A4Q5BKX6 768 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 MARC1Q5VT66 337 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 SLC9A4Q6AI14 798 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 BRAT1Q6PJG6 821 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 Q6ZSR6 202 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 B4GALNT4Q76KP1 1039 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 PTAR1Q7Z6K3 402 aaPredicted RBP13.27□□□□□ -0.29
PRKDC-206ENST00000536429 RHOT1Q8IXI2 618 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.27□□□□□ -0.29
PRKDC-206ENST00000536429 BAHD1Q8TBE0 780 aaPredicted RBP13.27□□□□□ -0.29
PRKDC-206ENST00000536429 HCAR2Q8TDS4 363 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 CXorf40AQ8TE69 158 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 SAP25Q8TEE9 199 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 MAML1Q92585 1016 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 SKA1Q96BD8 255 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 KLHDC7BQ96G42 594 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 NUDCD1Q96RS6 583 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 LACRTQ9GZZ8 138 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 SCUBE2Q9NQ36 999 aa13.27□□□□□ -0.29
PRKDC-206ENST00000536429 MBNL1Q9NR56 388 aaKnown RBP13.27□□□□□ -0.29
PRKDC-206ENST00000536429 TPRP12270 2363 aaKnown RBP13.27□□□□□ -0.29
PRKDC-206ENST00000536429 A0A0A6YYK5 440 aaPredicted RBP13.26□□□□□ -0.29
PRKDC-206ENST00000536429 A8MX80 341 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 MATN3O15232 486 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 HTRA2O43464 458 aaPredicted RBP13.26□□□□□ -0.29
PRKDC-206ENST00000536429 PCDHGA12O60330 932 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 SDC3O75056 442 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 SPINK2P20155 84 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 EPHA8P29322 1005 aaPredicted RBP13.26□□□□□ -0.29
PRKDC-206ENST00000536429 IGFALSP35858 605 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 HSPA9P38646 679 aaKnown RBP13.26□□□□□ -0.29
PRKDC-206ENST00000536429 MMP12P39900 470 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 RXRGP48443 463 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 DYNLT1P63172 113 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 ADCY2Q08462 1091 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 OVGP1Q12889 678 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 RALGDSQ12967 914 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 TRIP6Q15654 476 aaKnown RBP13.26□□□□□ -0.29
PRKDC-206ENST00000536429 ZNF542PQ5EBM4 170 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 CFAP58Q5T655 872 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 FRYQ5TBA9 3013 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 KYAT3Q6YP21 454 aaKnown RBP13.26□□□□□ -0.29
PRKDC-206ENST00000536429 RFX6Q8HWS3 928 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 TPCN2Q8NHX9 752 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 RHBDD1Q8TEB9 315 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 KRT35Q92764 455 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 CENPTQ96BT3 561 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 TSGA13Q96PP4 275 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 LENG8Q96PV6 779 aaPredicted RBP13.26□□□□□ -0.29
PRKDC-206ENST00000536429 SMIM14Q96QK8 99 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 LGMNQ99538 433 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 BAG1Q99933 345 aaPredicted RBP13.26□□□□□ -0.29
PRKDC-206ENST00000536429 DESI2Q9BSY9 194 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 TRPM6Q9BX84 2022 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 ERVMER34-1Q9H9K5 563 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 CHD8Q9HCK8 2581 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 GPR27Q9NS67 375 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 WASF3Q9UPY6 502 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 ATP8A1Q9Y2Q0 1164 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 HEY1Q9Y5J3 304 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 HS3ST3A1Q9Y663 406 aa13.26□□□□□ -0.29
PRKDC-206ENST00000536429 GOLGA8CPA6NN73 597 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 A6NNZ2 444 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 ZNF487B1APH4 448 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms