RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 NEK3P51956 506 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 VCPP55072 806 aaKnown RBP6.71□□□□□ -1.34
USP28-202ENST00000535607 MTTPP55157 894 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 BACE1P56817 501 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 NLRP11P59045 1033 aaKnown RBP6.71□□□□□ -1.34
USP28-202ENST00000535607 FMO1Q01740 532 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 ALDH6A1Q02252 535 aaKnown RBP6.71□□□□□ -1.34
USP28-202ENST00000535607 SLC18A2Q05940 514 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 FSTL1Q12841 308 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 OVGP1Q12889 678 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 LPIN1Q14693 890 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 PLEKHG6Q3KR16 790 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 GRAMD1BQ3KR37 738 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 SYCP2LQ5T4T6 812 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 STXBP5Q5T5C0 1151 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 KLHDC10Q6PID8 442 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 UGT2A3Q6UWM9 527 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 C16orf89Q6UX73 402 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 TSHZ1Q6ZSZ6 1077 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 C3orf62Q6ZUJ4 267 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 C1orf186Q6ZWK4 172 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 SETD3Q86TU7 594 aaPredicted RBP6.71□□□□□ -1.34
USP28-202ENST00000535607 STK32CQ86UX6 486 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 FAM160B2Q86V87 743 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 SATL1Q86VE3 508 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 SIAH1Q8IUQ4 282 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 NUDCD3Q8IVD9 361 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 IGDCC3Q8IVU1 814 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 MCOLN2Q8IZK6 566 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 ZDHHC14Q8IZN3 488 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 BBS5Q8N3I7 341 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 TRIML2Q8N7C3 387 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 RBM15BQ8NDT2 890 aaKnown RBP6.71□□□□□ -1.34
USP28-202ENST00000535607 OLIG1Q8TAK6 271 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 LMO3Q8TAP4 145 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 FNDC8Q8TC99 324 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 ACTRT2Q8TDY3 377 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 ATG4AQ8WYN0 398 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 NKD2Q969F2 451 aaPredicted RBP6.71□□□□□ -1.34
USP28-202ENST00000535607 TTC17Q96AE7 1141 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 PANX3Q96QZ0 392 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 SENP7Q9BQF6 1050 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 C11orf84Q9BUA3 381 aaPredicted RBP6.71□□□□□ -1.34
USP28-202ENST00000535607 BTBD2Q9BX70 525 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 MAK16Q9BXY0 300 aaKnown RBP6.71□□□□□ -1.34
USP28-202ENST00000535607 DRC3Q9H069 523 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 POFUT1Q9H488 388 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 KCNK12Q9HB15 430 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 GBA2Q9HCG7 927 aaPredicted RBP6.71□□□□□ -1.34
USP28-202ENST00000535607 TMEM8AQ9HCN3 771 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 PALMDQ9NP74 551 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 VPS45Q9NRW7 570 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 C1orf112Q9NSG2 853 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 ETNK2Q9NVF9 386 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 THAP1Q9NVV9 213 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 RSL24D1Q9UHA3 163 aaKnown RBP6.71□□□□□ -1.34
USP28-202ENST00000535607 SLC7A8Q9UHI5 535 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 ZNF180Q9UJW8 692 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 CNOT11Q9UKZ1 510 aaKnown RBP6.71□□□□□ -1.34
USP28-202ENST00000535607 BARX2Q9UMQ3 279 aaPredicted RBP6.71□□□□□ -1.34
USP28-202ENST00000535607 ARHGAP26Q9UNA1 814 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 PLA2G2DQ9UNK4 145 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 PLA2G4CQ9UP65 541 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 SCAF8Q9UPN6 1271 aaKnown RBP6.71□□□□□ -1.34
USP28-202ENST00000535607 LZTS1Q9Y250 596 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 HBS1LQ9Y450 684 aaKnown RBP6.71□□□□□ -1.34
USP28-202ENST00000535607 PARP14Q460N5 1801 aa6.71□□□□□ -1.34
USP28-202ENST00000535607 A0A0G2JLL6 359 aaPredicted RBP6.7□□□□□ -1.34
USP28-202ENST00000535607 A0A1W2PPM1 405 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 SH3PXD2BA1X283 911 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 RSPH10B2B2RC85 870 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 H0YCG3 227 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 K7ENM7 598 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 ZNF189O75820 626 aaPredicted RBP6.7□□□□□ -1.34
USP28-202ENST00000535607 CELF2O95319 508 aaKnown RBP6.7□□□□□ -1.34
USP28-202ENST00000535607 STAMBPO95630 424 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 PRLP01236 227 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 KRT1P04264 644 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 CYP1A1P04798 512 aaPredicted RBP6.7□□□□□ -1.34
USP28-202ENST00000535607 CALB1P05937 261 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 RSPH10BP0C881 870 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 SRGAP2BP0DMP2 458 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 KRT5P13647 590 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 CCDC130P13994 396 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 GCAP28676 217 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 NMT1P30419 496 aaKnown RBP6.7□□□□□ -1.34
USP28-202ENST00000535607 HMOX2P30519 316 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 ALDH1A3P47895 512 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 GPC3P51654 580 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 ITGA1P56199 1179 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 BCAR1P56945 870 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 TUBA4AP68366 448 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 JAG1P78504 1218 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 GCNT1Q02742 428 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 KDSRQ06136 332 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 STX3Q13277 289 aa6.7□□□□□ -1.34
USP28-202ENST00000535607 SMAD4Q13485 552 aaKnown RBP6.7□□□□□ -1.34
USP28-202ENST00000535607 PIGHQ14442 188 aaPredicted RBP6.7□□□□□ -1.34
USP28-202ENST00000535607 HADHQ16836 314 aaKnown RBP6.7□□□□□ -1.34
USP28-202ENST00000535607 CCDC142Q17RM4 750 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms