RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 MKL2Q9ULH7 1088 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 MTF2Q9Y483 593 aaPredicted RBP18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 FGF19O95750 216 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 RCVRNP35243 200 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 CCNIQ14094 377 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 TXNDC11Q6PKC3 985 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 ZNF670Q9BS34 389 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 ELL3Q9HB65 397 aaPredicted RBP18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 TAS2R14Q9NYV8 317 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 SUCOQ9UBS9 1254 aaKnown RBP18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 ACTL7BQ9Y614 415 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 ZNF780BQ9Y6R6 833 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 H3BQF6 201 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 CAPN15O75808 1086 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 GABRR2P28476 465 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 TOP3AQ13472 1001 aaPredicted RBP18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 LPIN1Q14693 890 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 CD101Q93033 1021 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 KPNA4O00629 521 aaPredicted RBP18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 SNRPB2P08579 225 aaKnown RBP18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 GOT1P17174 413 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 TPP2P29144 1249 aaPredicted RBP18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 MRPS22P82650 360 aaKnown RBP18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 ALLCQ8N6M5 410 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 EEF1AKMT1Q8WVE0 214 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 KIAA1522Q9P206 1035 aaPredicted RBP18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 PCDHGC5Q9Y5F6 944 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 CCNYL3P0C7X3 344 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 FGFR3P22607 806 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 KELP23276 732 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 GRIA4P48058 902 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 MAXP61244 160 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 Q96MT0 163 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 DGCR6LQ9BY27 220 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 TBC1D3DA0A087WVF3 549 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 TBC1D3IA0A087WXS9 549 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 TBC1D3EA0A087X179 549 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 TBC1D3KA0A087X1G2 549 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 TBC1D3FA6NER0 549 aaPredicted RBP18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 TBC1D3LB9A6J9 549 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 TBC1D3HP0C7X1 549 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 PIRTP0C851 137 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 PLPP4Q5VZY2 271 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 TBC1D3GQ6DHY5 549 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 TBC1D3CQ6IPX1 549 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 CHADLQ6NUI6 762 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 AADACL2Q6P093 401 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 KLHL35Q6PF15 583 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 TBC1D3Q8IZP1 549 aaPredicted RBP18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 CDYL2Q8N8U2 506 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 HDAC7Q8WUI4 952 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 ZBTB10Q96DT7 871 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 ANKRD27Q96NW4 1050 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 LMAN2LQ9H0V9 348 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 PRDM12Q9H4Q4 367 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 KCNE2Q9Y6J6 123 aa18.27■□□□□ 0.52
SFSWAP-203ENST00000535236 SLIT1O75093 1534 aa18.27■□□□□ 0.51
SFSWAP-203ENST00000535236 A0A087WXM4 84 aa18.27■□□□□ 0.51
SFSWAP-203ENST00000535236 AP3D1O14617 1153 aa18.27■□□□□ 0.51
SFSWAP-203ENST00000535236 BMP7P18075 431 aa18.27■□□□□ 0.51
SFSWAP-203ENST00000535236 MRPS5P82675 430 aaKnown RBP18.27■□□□□ 0.51
SFSWAP-203ENST00000535236 CRTC3Q6UUV7 619 aa18.27■□□□□ 0.51
SFSWAP-203ENST00000535236 TOP6BLQ8N6T0 577 aa18.27■□□□□ 0.51
SFSWAP-203ENST00000535236 PIWIL2Q8TC59 973 aaKnown RBP18.27■□□□□ 0.51
SFSWAP-203ENST00000535236 PURBQ96QR8 312 aaKnown RBP18.27■□□□□ 0.51
SFSWAP-203ENST00000535236 MRPL57Q9BQC6 102 aaKnown RBP18.27■□□□□ 0.51
SFSWAP-203ENST00000535236 PAIP1Q9H074 479 aaKnown RBP18.27■□□□□ 0.51
SFSWAP-203ENST00000535236 BTRCQ9Y297 605 aa18.27■□□□□ 0.51
SFSWAP-203ENST00000535236 SCN2BO60939 215 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 CCNDBP1O95273 360 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 HOXA10P31260 410 aaPredicted RBP18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 GRM5P41594 1212 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 CDK18Q07002 472 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 TAF5Q15542 800 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 GRIP2Q9C0E4 1043 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 NUAK2Q9H093 628 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 PPRC1Q5VV67 1664 aaKnown RBP18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 RPL22P35268 128 aaKnown RBP18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 MAPK10P53779 464 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 SULT2A1Q06520 285 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 NDUFA5Q16718 116 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 MAGEE2Q8TD90 523 aaPredicted RBP18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 KCTD4Q8WVF5 259 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 COPS8Q99627 209 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 MRPS33Q9Y291 106 aaKnown RBP18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 NEDD8-MDP1E9PL57 170 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 CLDN5O00501 218 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 DGCR6Q14129 220 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 LSM12Q3MHD2 195 aaKnown RBP18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 TMC5Q6UXY8 1006 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 PROSER1Q86XN7 944 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 TSPAN18Q96SJ8 248 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 TOR4AQ9NXH8 423 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 PIK3C2BO00750 1634 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 MCIDASD6RGH6 385 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 PRMT3O60678 531 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 IL12RB1P42701 662 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 CASP5P51878 434 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 MIIPQ5JXC2 388 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 ALKBH2Q6NS38 261 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms