RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 RCAN1P53805 252 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 UCNP55089 124 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 C21orf59P57076 290 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 IL13RA1P78552 427 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 TSPY1Q01534 308 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 ST3GAL1Q11201 340 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 TOB2Q14106 344 aaPredicted RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 TMEM132DQ14C87 1099 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 PPP2R5AQ15172 486 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 GPR19Q15760 415 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 GEN1Q17RS7 908 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 KRTAP15-1Q3LI76 137 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 C3orf38Q5JPI3 329 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 TMEM215Q68D42 235 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 RINT1Q6NUQ1 792 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 FAM171BQ6P995 826 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 CRTC1Q6UUV9 634 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 ARHGAP36Q6ZRI8 547 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 C1orf186Q6ZWK4 172 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 LARP4Q71RC2 724 aaKnown RBP eCLIP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 ZNF627Q7L945 461 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 CXXC5Q7LFL8 322 aaKnown RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 TRMT11Q7Z4G4 463 aaKnown RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 APBB1IPQ7Z5R6 666 aaPredicted RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 ADGRE4PQ86SQ3 457 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 SPATS2Q86XZ4 545 aaKnown RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 SPATA2LQ8IUW3 424 aaPredicted RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 SLC25A45Q8N413 288 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 FSIP1Q8NA03 581 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 SCAMP5Q8TAC9 235 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 C2orf15Q8WU43 125 aaKnown RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 SCFD1Q8WVM8 642 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 PRCCQ92733 491 aaPredicted RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 KIFAP3Q92845 792 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 MYLPFQ96A32 169 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 ATXN7L3BQ96GX2 97 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 SLC46A1Q96NT5 459 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 KCNK16Q96T55 309 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 ELF4Q99607 663 aaPredicted RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 ACBD6Q9BR61 282 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 BBS2Q9BXC9 721 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 DPH1Q9BZG8 443 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 OR10A2Q9H208 303 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 PIF1Q9H611 641 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 POLR1BQ9H9Y6 1135 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 PLEKHA5Q9HAU0 1116 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 MSL2Q9HCI7 577 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 ZNF71Q9NQZ8 489 aaPredicted RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 DDX19AQ9NUU7 478 aaKnown RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 UCKL1Q9NWZ5 548 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 DDX43Q9NXZ2 648 aaKnown RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 THAP10Q9P2Z0 257 aaPredicted RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 MAGEC2Q9UBF1 373 aaPredicted RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 UXTQ9UBK9 157 aaPredicted RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 AGAP1Q9UPQ3 857 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 SATB2Q9UPW6 733 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 CA5BQ9Y2D0 317 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 SH3BP1Q9Y3L3 701 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 NME7Q9Y5B8 376 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 PCDHB6Q9Y5E3 794 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 SNX14Q9Y5W7 946 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 PTPRDP23468 1912 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 CACNA1DQ01668 2161 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 MUC22E2RYF6 1773 aaPredicted RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 TACC2O95359 2948 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 A0A0G2JNJ9 132 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 A0A1B0GVM2 712 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 A0A1W2PR77 199 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 TLR4O00206 839 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 LAD1O00515 517 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 CPLX1O14810 134 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 MDM4O15151 490 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 VILLO15195 856 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 FFAR2O15552 330 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 OPA1O60313 960 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 SYNCRIPO60506 623 aaKnown RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 NEMFO60524 1076 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 TNFSF15O95150 251 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 SEMA4FO95754 770 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 IGLV3-19P01714 112 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 KLKB1P03952 638 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 PABPC1P11940 636 aaKnown RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 TGM2P21980 687 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 HSD3B2P26439 372 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 RPA1P27694 616 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 EPHA8P29322 1005 aaPredicted RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 MC4RP32245 332 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 UQCRFS1P47985 274 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 TAF6P49848 677 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 GALCP54803 685 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 RIPPLY3P57055 190 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 RPS14P62263 151 aaKnown RBP3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 SMARCB1Q12824 385 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 STRN3Q13033 797 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 PAK1Q13153 545 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 DUSP8Q13202 625 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 KCNJ12Q14500 433 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 ZNF234Q14588 700 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 STARD3Q14849 445 aa3.11□□□□□ -1.91
CHMP4A-208ENST00000534106 ZRSR1Q15695 479 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms