RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 TMCO4Q5TGY1 634 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 PIK3R6Q5UE93 754 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 SNX30Q5VWJ9 437 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 DENND5AQ6IQ26 1287 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 KLHDC10Q6PID8 442 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 KDELC1Q6UW63 502 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 ZC3HC1Q86WB0 502 aaKnown RBP9.77□□□□□ -0.85
CHKA-207ENST00000533728 NPAS4Q8IUM7 802 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 DTWD2Q8NBA8 298 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 PDZD8Q8NEN9 1154 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 PPP1R14CQ8TAE6 165 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 NSMCE1Q8WV22 266 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 AZIN2Q96A70 460 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 IMP4Q96G21 291 aaKnown RBP9.77□□□□□ -0.85
CHKA-207ENST00000533728 CELF6Q96J87 481 aaKnown RBP9.77□□□□□ -0.85
CHKA-207ENST00000533728 TSNARE1Q96NA8 513 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 ZNF599Q96NL3 588 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 RAD9AQ99638 391 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 BTBD10Q9BSF8 475 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 TBC1D10AQ9BXI6 508 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 NOL6Q9H6R4 1146 aaKnown RBP9.77□□□□□ -0.85
CHKA-207ENST00000533728 TREX1Q9NSU2 369 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 C20orf96Q9NUD7 363 aaPredicted RBP9.77□□□□□ -0.85
CHKA-207ENST00000533728 RBM22Q9NW64 420 aaKnown RBP eCLIP9.77□□□□□ -0.85
CHKA-207ENST00000533728 MARCH5Q9NX47 278 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 SFMBT1Q9UHJ3 866 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 IPO11Q9UI26 975 aaKnown RBP9.77□□□□□ -0.85
CHKA-207ENST00000533728 APOBEC2Q9Y235 224 aaKnown RBP9.77□□□□□ -0.85
CHKA-207ENST00000533728 PCDHB12Q9Y5F1 795 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 A0A096LPK6 155 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.76□□□□□ -0.85
CHKA-207ENST00000533728 HEATR9A2RTY3 570 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 MTMR11A4FU01 709 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 EIF4E1BA6NMX2 242 aaKnown RBP9.76□□□□□ -0.85
CHKA-207ENST00000533728 CAPN14A8MX76 684 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 MSI1O43347 362 aaKnown RBP9.76□□□□□ -0.85
CHKA-207ENST00000533728 ATP9BO43861 1147 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 TRIM13O60858 407 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 USP12O75317 370 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 NEBLO76041 1014 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 KLHL2O95198 593 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 EFEMP2O95967 443 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 PEX11BO96011 259 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 EPOP01588 193 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 HLA-DQB2P05538 268 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 RALBP11234 206 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 CPA3P15088 417 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 EZRP15311 586 aaKnown RBP9.76□□□□□ -0.85
CHKA-207ENST00000533728 HOXB8P17481 243 aaPredicted RBP9.76□□□□□ -0.85
CHKA-207ENST00000533728 NMBRP28336 390 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 CRABP2P29373 138 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 SERPINB3P29508 390 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 SERPINB5P36952 375 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 PAPOLAP51003 745 aaKnown RBP9.76□□□□□ -0.85
CHKA-207ENST00000533728 CCNG1P51959 295 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 ABCE1P61221 599 aaKnown RBP9.76□□□□□ -0.85
CHKA-207ENST00000533728 SLC12A1Q13621 1099 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 IKBKEQ14164 716 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 HSP90AA5PQ58FG0 334 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 MS4A13Q5J8X5 152 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 FAM171A1Q5VUB5 890 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 METTL21CQ5VZV1 264 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 ALG1LQ6GMV1 187 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 FUT10Q6P4F1 479 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 OTOP3Q7RTS5 596 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 C14orf80Q86SX3 495 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 ARID3BQ8IVW6 561 aaPredicted RBP9.76□□□□□ -0.85
CHKA-207ENST00000533728 TMEFF1Q8IYR6 380 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 KIRREL3Q8IZU9 778 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 SUMF1Q8NBK3 374 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 NETO2Q8NC67 525 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 C2CD4AQ8NCU7 369 aaPredicted RBP9.76□□□□□ -0.85
CHKA-207ENST00000533728 FBXO32Q969P5 355 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 UTP4Q969X6 686 aaKnown RBP9.76□□□□□ -0.85
CHKA-207ENST00000533728 MFSD3Q96ES6 412 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 THOC1Q96FV9 657 aaKnown RBP9.76□□□□□ -0.85
CHKA-207ENST00000533728 MRGPRX2Q96LB1 330 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 MECRQ9BV79 373 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 FICDQ9BVA6 458 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 PHF7Q9BWX1 381 aaPredicted RBP9.76□□□□□ -0.85
CHKA-207ENST00000533728 C1orf21Q9H246 121 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 TRPC7Q9HCX4 862 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 CHRAC1Q9NRG0 131 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 TMEM216Q9P0N5 145 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 MARCH2Q9P0N8 246 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 GMIPQ9P107 970 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 ZNF212Q9UDV6 495 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 DNAJB4Q9UDY4 337 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 BAIAP2L1Q9UHR4 511 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 HAO1Q9UJM8 370 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.76□□□□□ -0.85
CHKA-207ENST00000533728 PRG3Q9Y2Y8 225 aaPredicted RBP9.76□□□□□ -0.85
CHKA-207ENST00000533728 BACE2Q9Y5Z0 518 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 CDY1Q9Y6F8 540 aa9.76□□□□□ -0.85
CHKA-207ENST00000533728 UBR5O95071 2799 aaPredicted RBP9.75□□□□□ -0.85
CHKA-207ENST00000533728 A0A087X1B8 175 aa9.75□□□□□ -0.85
CHKA-207ENST00000533728 F5H423 210 aaPredicted RBP9.75□□□□□ -0.85
CHKA-207ENST00000533728 F8W810 466 aa9.75□□□□□ -0.85
CHKA-207ENST00000533728 SLCO1B7G3V0H7 640 aa9.75□□□□□ -0.85
CHKA-207ENST00000533728 MAGEC1O60732 1142 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms