RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 PDZD3Q86UT5 571 aa12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 NETO2Q8NC67 525 aa12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 LMX1AQ8TE12 382 aa12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 GLMNQ92990 594 aa12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 CELF6Q96J87 481 aaKnown RBP12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 EXOC2Q96KP1 924 aa12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 DCBLD2Q96PD2 775 aa12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 TUBGCP5Q96RT8 1024 aa12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 SLC13A1Q9BZW2 595 aa12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 SLC39A8Q9C0K1 460 aa12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 PDFQ9HBH1 243 aa12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 GPATCH2LQ9NWQ4 482 aa12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 LHX3Q9UBR4 397 aa12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 CNOT8Q9UFF9 292 aaKnown RBP12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 KLF15Q9UIH9 416 aa12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 SALL4Q9UJQ4 1053 aa12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 MYLKQ15746 1914 aa12.54□□□□□ -0.4
CAPRIN1-213ENST00000533562 ATMINO43313 823 aaPredicted RBP12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 PIGNO95427 931 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 ERCC2P18074 760 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 ITIH2P19823 946 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 MIPP30301 263 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 EIF4A3P38919 411 aaKnown RBP12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 RPIAP49247 311 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 PEX5P50542 639 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 BLKP51451 505 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 POLR2LP62875 67 aaKnown RBP12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 TPM4P67936 248 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 NSUN2Q08J23 767 aaKnown RBP eCLIP12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 EIF2B5Q13144 721 aaKnown RBP12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 NR1I3Q14994 352 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 ACAP1Q15027 740 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 LRRC14Q15048 493 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 PRRT3Q5FWE3 981 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 PPP6R3Q5H9R7 873 aaPredicted RBP12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 FAXCQ5TGI0 409 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 KDM7AQ6ZMT4 941 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 LZTR1Q8N653 840 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 ARFGAP1Q8N6T3 406 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 IFI44Q8TCB0 444 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 MAPK15Q8TD08 544 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 FGF11Q92914 225 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 TBATAQ96M53 351 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 NAP1L5Q96NT1 182 aaPredicted RBP12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 DEPDC7Q96QD5 511 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 WRAP53Q9BUR4 548 aaKnown RBP12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 SNRNP25Q9BV90 132 aaKnown RBP12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 ATP13A3Q9H7F0 1226 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 ZWILCHQ9H900 591 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 MBNL1Q9NR56 388 aaKnown RBP12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 APOBEC3BQ9UH17 382 aaKnown RBP12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 BZW2Q9Y6E2 419 aaKnown RBP12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 SMG1Q96Q15 3661 aaKnown RBP12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 BPTFQ12830 3046 aa12.53□□□□□ -0.4
CAPRIN1-213ENST00000533562 CPED1A4D0V7 1026 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 LMO7DNF2Z398 122 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 DFFAO00273 331 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 DDX3XO00571 662 aaKnown RBP eCLIP12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 BUB1BO60566 1050 aaPredicted RBP12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 ANXA6P08133 673 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 MYF5P13349 255 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 HTR1BP28222 390 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 SERPINA4P29622 427 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 PCK1P35558 622 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 ACTN2P35609 894 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 IGFALSP35858 605 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 EIF2S3P41091 472 aaKnown RBP12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 ABCG1P45844 678 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 ADKP55263 362 aaKnown RBP12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 PPARDQ03181 441 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 RFTN1Q14699 578 aaPredicted RBP12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 CDKN3Q16667 212 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 CA9Q16790 459 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 DEFB133Q30KQ1 61 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 BOLA3Q53S33 107 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 FIGNQ5HY92 759 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 TPRG1LQ5T0D9 272 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 CDCP2Q5VXM1 449 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 MACC1Q6ZN28 852 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 SRLQ86TD4 932 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 PHACTR4Q8IZ21 702 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 LSMEM2Q8N112 164 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 PAF1Q8N7H5 531 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 TP53I13Q8NBR0 393 aaPredicted RBP12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 TSEN2Q8NCE0 465 aaKnown RBP12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 TPCN2Q8NHX9 752 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 SCG3Q8WXD2 468 aaKnown RBP12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 RNF25Q96BH1 459 aaPredicted RBP12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 ZNF653Q96CK0 615 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 PEBP4Q96S96 227 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 KCTD15Q96SI1 283 aaPredicted RBP12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 CINPQ9BW66 212 aaPredicted RBP12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 CAAP1Q9H8G2 361 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 SP110Q9HB58 689 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 PCDH12Q9NPG4 1184 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 MYO1AQ9UBC5 1043 aa12.52□□□□□ -0.41
CAPRIN1-213ENST00000533562 BAHCC1Q9P281 2608 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 LY6G6EA0A0G2JKS1 128 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 TSPAN11A1L157 253 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 EME2A4GXA9 379 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms