RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 ABRQ12979 859 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 APLFQ8IW19 511 aaPredicted RBP14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 EFCAB3Q8N7B9 438 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 TPD52L3Q96J77 140 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 COPS8Q99627 209 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 TCF25Q9BQ70 676 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 SLITRK2Q9H156 845 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 GDF3Q9NR23 364 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 IL1RAPL1Q9NZN1 696 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 MRPS33Q9Y291 106 aaKnown RBP14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 LRRC10BA6NIK2 292 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 MYBL2P10244 700 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 RPL22P35268 128 aaKnown RBP14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 CDK18Q07002 472 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 CNSTQ6PJW8 725 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 CIR1Q86X95 450 aaPredicted RBP14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 GATAD2AQ86YP4 633 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 ALLCQ8N6M5 410 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 GLMNQ92990 594 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 CERS2Q96G23 380 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 DLGAP2Q9P1A6 1054 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 PCDHGA4Q9Y5G9 962 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 RECQL5O94762 991 aaPredicted RBP14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 C4BPAP04003 597 aaKnown RBP14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 DSELQ8IZU8 1212 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 PCDHGC5Q9Y5F6 944 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 SNX10Q9Y5X0 201 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 hCG_2014768A0A024R1R8 64 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 NFATC1O95644 943 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 HIST1H2ABP04908 130 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 ERCC2P18074 760 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 ATP5F1P24539 256 aaPredicted RBP14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 SNX30Q5VWJ9 437 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 FAM151BQ6UXP7 276 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 HIST3H2AQ7L7L0 130 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 UPF1Q92900 1129 aaKnown RBP eCLIP14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 HIST1H2ACQ93077 130 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 EMID1Q96A84 441 aaPredicted RBP14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 INVSQ9Y283 1065 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 KCNE2Q9Y6J6 123 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 FAM237AA0A1B0GTK4 181 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 FCHO1O14526 889 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 GRM6O15303 877 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 PIGNO95427 931 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 PBX3P40426 434 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 SLC5A3P53794 718 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 ARMCX4Q5H9R4 360 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 BBS12Q6ZW61 710 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 EIF1ADQ8N9N8 165 aaKnown RBP14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 SCAIQ8N9R8 606 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 SMG7Q92540 1137 aaKnown RBP14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 PPP3R2Q96LZ3 170 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 NIFKQ9BYG3 293 aaKnown RBP14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 MORF4L1Q9UBU8 362 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 XRN1Q8IZH2 1706 aaKnown RBP14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 A0A1W2PQ67 120 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 OR10H2O60403 315 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 MYL12AP19105 171 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 ME2P23368 584 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 CORO1AP31146 461 aaKnown RBP14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 ATP6V0D1P61421 351 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 PTPRNQ16849 979 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 BMT2Q1RMZ1 405 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 ZCWPW2Q504Y3 356 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 FOXR1Q6PIV2 292 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 UNC5AQ6ZN44 842 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 OXNAD1Q96HP4 312 aaPredicted RBP14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 OR10H1Q9Y4A9 318 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 IGLV3-22A0A075B6J6 115 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 ELFN1P0C7U0 828 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 RANBP1P43487 201 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 MPPE1Q53F39 396 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 PGM2Q96G03 612 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 CPXM1Q96SM3 734 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 MRPS26Q9BYN8 205 aaKnown RBP14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 ABCG4Q9H172 646 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 EXO5Q9H790 373 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 FANCEQ9HB96 536 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 NCANO14594 1321 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 CCDC166P0CW27 439 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 ZNF844Q08AG5 666 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 IRF2BP2Q7Z5L9 587 aa14.87□□□□□ -0.03
PCDHA9-202ENST00000532602 SMIM31A0A1B0GVY4 71 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 ISM1B1AKI9 464 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 ULK1O75385 1050 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 HSMCR30P0CW71 290 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 TCHHL1Q5QJ38 904 aaPredicted RBP14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 ZFP1Q6P2D0 407 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 CYB5D1Q6P9G0 228 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 COL26A1Q96A83 441 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 BCLAF3A2AJT9 711 aaKnown RBP14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 STX4Q12846 297 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 TMEM63BQ5T3F8 832 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 FOXR2Q6PJQ5 311 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 LINGO4Q6UY18 593 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 S100A13Q99584 98 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 hCG_1818297A0A087WSY0 165 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 CRTC3Q6UUV7 619 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 XYLT1Q86Y38 959 aa14.86□□□□□ -0.03
PCDHA9-202ENST00000532602 RBFAQ8N0V3 343 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms