RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 PDFQ9HBH1 243 aa22.5■■□□□ 1.19
TRAPPC4-210ENST00000531290 CNOT8Q9UFF9 292 aaKnown RBP22.5■■□□□ 1.19
TRAPPC4-210ENST00000531290 APOBEC3BQ9UH17 382 aaKnown RBP22.5■■□□□ 1.19
TRAPPC4-210ENST00000531290 ACACAQ13085 2346 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 LY6G6EA0A0G2JKS1 128 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 TLX3O43711 291 aaPredicted RBP22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 RPIAP49247 311 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 KLHL30Q0D2K2 578 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 LRRC14Q15048 493 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 CDKN3Q16667 212 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 PPP6R3Q5H9R7 873 aaPredicted RBP22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 CDCP2Q5VXM1 449 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 BRAT1Q6PJG6 821 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 RFX8Q6ZV50 586 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 PHACTR4Q8IZ21 702 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 ARFGAP1Q8N6T3 406 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 TP53I13Q8NBR0 393 aaPredicted RBP22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 FNIP1Q8TF40 1166 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 TUBGCP5Q96RT8 1024 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 SNRNP25Q9BV90 132 aaKnown RBP22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 PCDH12Q9NPG4 1184 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 SCINQ9Y6U3 715 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 U3KQA8 63 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 DOCK4Q8N1I0 1966 aa22.49■■□□□ 1.19
TRAPPC4-210ENST00000531290 KNTC1P50748 2209 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 SERPINC1P01008 464 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 ERCC2P18074 760 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 MIPP30301 263 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 PRKCIP41743 596 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 ADKP55263 362 aaKnown RBP22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 PPARDQ03181 441 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 C1orf61Q13536 156 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 NR0B2Q15466 257 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 MACC1Q6ZN28 852 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 EFL1Q7Z2Z2 1120 aaKnown RBP22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 SRLQ86TD4 932 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 CAMK1DQ8IU85 385 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 PSTKQ8IV42 348 aaKnown RBP22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 RBFAQ8N0V3 343 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 PAF1Q8N7H5 531 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 TRIM11Q96F44 468 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 TBATAQ96M53 351 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 NAP1L5Q96NT1 182 aaPredicted RBP22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 PEBP4Q96S96 227 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 KCTD15Q96SI1 283 aaPredicted RBP22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 EDEM3Q9BZQ6 932 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 TCEAL2Q9H3H9 227 aaPredicted RBP22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 ATP13A3Q9H7F0 1226 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 SP110Q9HB58 689 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 MRPL47Q9HD33 250 aaKnown RBP22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 PCDHB1Q9Y5F3 818 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 URB1O60287 2271 aaKnown RBP22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 ITPR1Q14643 2758 aa22.48■■□□□ 1.19
TRAPPC4-210ENST00000531290 TSPAN11A1L157 253 aa22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 TMEM110-MUSTN1A8MSY1 372 aa22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 DFFAO00273 331 aa22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 DDX3XO00571 662 aaKnown RBP eCLIP22.47■■□□□ 1.198e-12■■■■□ 21.2
TRAPPC4-210ENST00000531290 LZTS3O60299 673 aaPredicted RBP22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 BUB1BO60566 1050 aaPredicted RBP22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 ANXA6P08133 673 aa22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 MYBL1P10243 752 aa22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 ITPKBP27987 946 aa22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 SERPINA4P29622 427 aa22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 CSNK1DP48730 415 aa22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 PEX5P50542 639 aa22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 BLKP51451 505 aa22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 ZNF135P52742 658 aaPredicted RBP22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 COL9A2Q14055 689 aaPredicted RBP22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 IRF4Q15306 451 aa22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 TSEN2Q8NCE0 465 aaKnown RBP22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 TPCN2Q8NHX9 752 aa22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 SNIP1Q8TAD8 396 aaKnown RBP22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 ZNF653Q96CK0 615 aa22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 CINPQ9BW66 212 aaPredicted RBP22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 TRIM7Q9C029 511 aa22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 MYO1AQ9UBC5 1043 aa22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 COQ6Q9Y2Z9 468 aa22.47■■□□□ 1.19
TRAPPC4-210ENST00000531290 A0A1B0GTH6 734 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 LMO7DNF2Z398 122 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 USP12O75317 370 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 CSO75390 466 aaKnown RBP22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 GCATO75600 419 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 SKILP12757 684 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 C6P13671 934 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 HTR1BP28222 390 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 HCAR3P49019 387 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 LIG3P49916 1009 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 RFTN1Q14699 578 aaPredicted RBP22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 WSCD2Q2TBF2 565 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 TBC1D25Q3MII6 688 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 SOWAHCQ53LP3 525 aaPredicted RBP22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 AFMIDQ63HM1 303 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 GUSBP11Q6P575 273 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 LSMEM2Q8N112 164 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 LRRC61Q9BV99 259 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 DOLKQ9UPQ8 538 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 ATP8A1Q9Y2Q0 1164 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 NBEAQ8NFP9 2946 aa22.46■■□□□ 1.19
TRAPPC4-210ENST00000531290 EME2A4GXA9 379 aaPredicted RBP22.45■■□□□ 1.18
TRAPPC4-210ENST00000531290 YY2O15391 372 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms