RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 LEFTY2O00292 366 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 FOXS1O43638 330 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 HLA-EP13747 358 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 SFPQP23246 707 aaKnown RBP eCLIP7.3□□□□□ -1.24
SVIP-204ENST00000530199 SERPINF1P36955 418 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 CCR2P41597 374 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 DGKEP52429 567 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 ITGA8P53708 1063 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 NHLH2Q02577 135 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 TLE3Q04726 772 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 GRSF1Q12849 480 aaKnown RBP eCLIP7.3□□□□□ -1.24
SVIP-204ENST00000530199 SMAD1Q15797 465 aaKnown RBP7.3□□□□□ -1.24
SVIP-204ENST00000530199 INSCQ1MX18 579 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 TSHZ3Q63HK5 1081 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 NAIF1Q69YI7 327 aaPredicted RBP7.3□□□□□ -1.24
SVIP-204ENST00000530199 PLAG1Q6DJT9 500 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 USP17L6PQ6QN14 398 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 KIAA0408Q6ZU52 694 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 USP49Q70CQ1 688 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 POLNQ7Z5Q5 900 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 RABEPKQ7Z6M1 372 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 GSPT2Q8IYD1 628 aaKnown RBP7.3□□□□□ -1.24
SVIP-204ENST00000530199 PSD4Q8NDX1 1056 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 NSUN7Q8NE18 718 aaKnown RBP7.3□□□□□ -1.24
SVIP-204ENST00000530199 TCEAL4Q96EI5 215 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 NAP1L4Q99733 375 aaKnown RBP7.3□□□□□ -1.24
SVIP-204ENST00000530199 SDF4Q9BRK5 362 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 GTPBP2Q9BX10 602 aaKnown RBP7.3□□□□□ -1.24
SVIP-204ENST00000530199 GCOM2Q9BZD3 368 aaPredicted RBP7.3□□□□□ -1.24
SVIP-204ENST00000530199 GPR88Q9GZN0 384 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 RIOX1Q9H6W3 641 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 KAT14Q9H8E8 782 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 LY9Q9HBG7 655 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 ADAM28Q9UKQ2 775 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 PIN4Q9Y237 131 aaKnown RBP7.3□□□□□ -1.24
SVIP-204ENST00000530199 GOLGA4Q13439 2230 aaKnown RBP7.29□□□□□ -1.24
SVIP-204ENST00000530199 SF3B1O75533 1304 aaKnown RBP eCLIP7.29□□□□□ -1.24
SVIP-204ENST00000530199 CLEC18AA5D8T8 446 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 KLRF2D3W0D1 207 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 H7C4K7 107 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 TRDMT1O14717 391 aaKnown RBP7.29□□□□□ -1.24
SVIP-204ENST00000530199 MEIS2O14770 477 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 ADAM12O43184 909 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 MOSPD3O75425 235 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 ATXN1LP0C7T5 689 aaKnown RBP7.29□□□□□ -1.24
SVIP-204ENST00000530199 IDEP14735 1019 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 CHRM3P20309 590 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 CXADRP78310 365 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 HHEXQ03014 270 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 LY6DQ14210 128 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 DMC1Q14565 340 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 GRM4Q14833 912 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 PTPAQ15257 358 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 PSMD5Q16401 504 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 FBXO43Q4G163 708 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 PREPLQ4J6C6 727 aaPredicted RBP7.29□□□□□ -1.24
SVIP-204ENST00000530199 ALFQ53S48 1182 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 CLEC18BQ6UXF7 455 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 HTR3DQ70Z44 454 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 LPCAT2Q7L5N7 544 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 HAUS6Q7Z4H7 955 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 CCDC60Q8IWA6 550 aaPredicted RBP7.29□□□□□ -1.24
SVIP-204ENST00000530199 LRRC56Q8IYG6 542 aaPredicted RBP7.29□□□□□ -1.24
SVIP-204ENST00000530199 CLEC18CQ8NCF0 446 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 OLIG1Q8TAK6 271 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 POC1BQ8TC44 478 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 FAM71BQ8TC56 605 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 NXPE2Q96DL1 559 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 RSPRY1Q96DX4 576 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 CNOT6LQ96LI5 555 aaKnown RBP7.29□□□□□ -1.24
SVIP-204ENST00000530199 GAD1Q99259 594 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 TTPALQ9BTX7 342 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 INO80BQ9C086 356 aaPredicted RBP7.29□□□□□ -1.24
SVIP-204ENST00000530199 TMEM8AQ9HCN3 771 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 ZNF302Q9NR11 478 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 GTSE1Q9NYZ3 720 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 HSFX1Q9UBD0 423 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 SHOC2Q9UQ13 582 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 RAD54BQ9Y620 910 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 ITPR2Q14571 2701 aa7.29□□□□□ -1.24
SVIP-204ENST00000530199 BSNQ9UPA5 3926 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 M0R3H8 397 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 PIP5K1BO14986 540 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 CSDE1O75534 798 aaKnown RBP7.28□□□□□ -1.24
SVIP-204ENST00000530199 PLATP00750 562 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 AFPP02771 609 aaKnown RBP7.28□□□□□ -1.24
SVIP-204ENST00000530199 CFIP05156 583 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 DHRS4L1P0CG22 281 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 TPH1P17752 444 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 CFPP27918 469 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 PTGER3P43115 390 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 PTDSS1P48651 473 aaKnown RBP7.28□□□□□ -1.24
SVIP-204ENST00000530199 MGAT5BQ3V5L5 792 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 ARHGAP15Q53QZ3 475 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 LYSMD4Q5XG99 296 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 CRTC1Q6UUV9 634 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 MARCH9Q86YJ5 346 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 LRRC71Q8N4P6 559 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 LEMD2Q8NC56 503 aa7.28□□□□□ -1.24
SVIP-204ENST00000530199 CNNM3Q8NE01 707 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms