RNA–Protein interactions for RNA: ENST00000528953.1

AP002008.2-203, humanhuman

TSL 1 (best)

Gene AP002008.2, Length 707 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.2-203ENST00000528953 TP53I13Q8NBR0 393 aaPredicted RBP17.71■□□□□ 0.43
AP002008.2-203ENST00000528953 ZNF653Q96CK0 615 aa17.71■□□□□ 0.43
AP002008.2-203ENST00000528953 ZNF641Q96N77 438 aaPredicted RBP17.71■□□□□ 0.43
AP002008.2-203ENST00000528953 KCTD15Q96SI1 283 aaPredicted RBP17.71■□□□□ 0.43
AP002008.2-203ENST00000528953 MBNL1Q9NR56 388 aaKnown RBP17.71■□□□□ 0.43
AP002008.2-203ENST00000528953 APOBEC3BQ9UH17 382 aaKnown RBP17.71■□□□□ 0.43
AP002008.2-203ENST00000528953 SCINQ9Y6U3 715 aa17.71■□□□□ 0.43
AP002008.2-203ENST00000528953 ASXL3Q9C0F0 2248 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 DDX3XO00571 662 aaKnown RBP eCLIP17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 TPP1O14773 563 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 TLX3O43711 291 aaPredicted RBP17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 BRINP1O60477 761 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 ERCC2P18074 760 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 ABCG1P45844 678 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 ZNF135P52742 658 aaPredicted RBP17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 KLHL30Q0D2K2 578 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 DEFB133Q30KQ1 61 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 PRRT3Q5FWE3 981 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 PPP6R3Q5H9R7 873 aaPredicted RBP17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 AFMIDQ63HM1 303 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 ERAP2Q6P179 960 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 BRAT1Q6PJG6 821 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 MACC1Q6ZN28 852 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 CAMK1DQ8IU85 385 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 PHACTR4Q8IZ21 702 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 RBFAQ8N0V3 343 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 IFI44Q8TCB0 444 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 TRIM11Q96F44 468 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 TBATAQ96M53 351 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 NAP1L5Q96NT1 182 aaPredicted RBP17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 DEPDC7Q96QD5 511 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 TUBGCP5Q96RT8 1024 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 IL12RB2Q99665 862 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 EDEM3Q9BZQ6 932 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 ABCG4Q9H172 646 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 TCEAL2Q9H3H9 227 aaPredicted RBP17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 PCDH12Q9NPG4 1184 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 SALL4Q9UJQ4 1053 aa17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 TDRD6O60522 2096 aaKnown RBP17.7■□□□□ 0.42
AP002008.2-203ENST00000528953 BUB1BO60566 1050 aaPredicted RBP17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 LRCH4O75427 683 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 PALMO75781 387 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 MYBL1P10243 752 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 C6P13671 934 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 EIF4A3P38919 411 aaKnown RBP17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 EIF2S3P41091 472 aaKnown RBP17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 RGRP47804 291 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 CSNK1DP48730 415 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 LRRC14Q15048 493 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 IRF4Q15306 451 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 CDKN3Q16667 212 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 CYP4V2Q6ZWL3 525 aaPredicted RBP17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 ARHGAP12Q8IWW6 846 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 TSEN2Q8NCE0 465 aaKnown RBP17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 SNIP1Q8TAD8 396 aaKnown RBP17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 MAPK15Q8TD08 544 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 LRRC61Q9BV99 259 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 CINPQ9BW66 212 aaPredicted RBP17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 SLC13A1Q9BZW2 595 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 ATP13A3Q9H7F0 1226 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 SP110Q9HB58 689 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 PNMA8BQ9ULN7 279 aaPredicted RBP17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 COQ6Q9Y2Z9 468 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 PCDHB1Q9Y5F3 818 aa17.69■□□□□ 0.42
AP002008.2-203ENST00000528953 LMO7DNF2Z398 122 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 DFFAO00273 331 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 RRP8O43159 456 aaKnown RBP17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 GCATO75600 419 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 SERPINC1P01008 464 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 SKILP12757 684 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 SERPINA4P29622 427 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 ACTN2P35609 894 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 MMP12P39900 470 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 HCAR3P49019 387 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 PEX5P50542 639 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 PPARDQ03181 441 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 RFTN1Q14699 578 aaPredicted RBP17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 NR1I3Q14994 352 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 IQCB1Q15051 598 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 NR0B2Q15466 257 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 WSCD2Q2TBF2 565 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 FAXCQ5TGI0 409 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 GUSBP11Q6P575 273 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 LRRC69Q6ZNQ3 347 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 SRLQ86TD4 932 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 NPWQ8N729 165 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 FGF11Q92914 225 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 BOCQ9BWV1 1114 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 MRPL47Q9HD33 250 aaKnown RBP17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 ATP8A1Q9Y2Q0 1164 aa17.68■□□□□ 0.42
AP002008.2-203ENST00000528953 CPED1A4D0V7 1026 aa17.67■□□□□ 0.42
AP002008.2-203ENST00000528953 EME2A4GXA9 379 aaPredicted RBP17.67■□□□□ 0.42
AP002008.2-203ENST00000528953 TMEM110-MUSTN1A8MSY1 372 aa17.67■□□□□ 0.42
AP002008.2-203ENST00000528953 CSO75390 466 aaKnown RBP17.67■□□□□ 0.42
AP002008.2-203ENST00000528953 ITPKBP27987 946 aa17.67■□□□□ 0.42
AP002008.2-203ENST00000528953 PCK1P35558 622 aa17.67■□□□□ 0.42
AP002008.2-203ENST00000528953 RPIAP49247 311 aa17.67■□□□□ 0.42
AP002008.2-203ENST00000528953 LIG3P49916 1009 aa17.67■□□□□ 0.42
AP002008.2-203ENST00000528953 BLKP51451 505 aa17.67■□□□□ 0.42
AP002008.2-203ENST00000528953 ADKP55263 362 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms