RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 NEMP2A6NFY4 417 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 A8MX80 341 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 C1QTNF9BB2RNN3 333 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 AP1G1O43747 822 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 SPOPO43791 374 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 PCDHGA12O60330 932 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 MFAP3LO75121 409 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 ZNF821O75541 412 aaPredicted RBP9.17□□□□□ -0.94
CMTM1-210ENST00000528441 RFPL3O75679 317 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 MAP3K6O95382 1288 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 KRT1P04264 644 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 CYP1A2P05177 515 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 ATXN1LP0C7T5 689 aaKnown RBP9.17□□□□□ -0.94
CMTM1-210ENST00000528441 ELFN1P0C7U0 828 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 C1QTNF9P0C862 333 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 KRT10P13645 584 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 TCF4P15884 667 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 IL1R2P27930 398 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 HNF1BP35680 557 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 MLLT3P42568 568 aaPredicted RBP9.17□□□□□ -0.94
CMTM1-210ENST00000528441 EPHB1P54762 984 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 POLR2LP62875 67 aaKnown RBP9.17□□□□□ -0.94
CMTM1-210ENST00000528441 SEMG2Q02383 582 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 RFTN1Q14699 578 aaPredicted RBP9.17□□□□□ -0.94
CMTM1-210ENST00000528441 TCEA2Q15560 299 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 DPYSL2Q16555 572 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 FAXCQ5TGI0 409 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 BRAT1Q6PJG6 821 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 DHRS13Q6UX07 377 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 KYAT3Q6YP21 454 aaKnown RBP9.17□□□□□ -0.94
CMTM1-210ENST00000528441 GCNT7Q6ZNI0 430 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 RD3Q7Z3Z2 195 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 DCP2Q8IU60 420 aaKnown RBP9.17□□□□□ -0.94
CMTM1-210ENST00000528441 CAMK1DQ8IU85 385 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 NDUFAF2Q8N183 169 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 GALNT15Q8N3T1 639 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 ARFGAP1Q8N6T3 406 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 NPWQ8N729 165 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 CCNYQ8ND76 341 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 FAM174AQ8TBP5 190 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 LMX1AQ8TE12 382 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 TEKT4Q8WW24 435 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 ZCCHC14Q8WYQ9 949 aaKnown RBP9.17□□□□□ -0.94
CMTM1-210ENST00000528441 CSPG4P5Q96PW8 444 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 TUBGCP5Q96RT8 1024 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 PACSIN1Q9BY11 444 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 SUDS3Q9H7L9 328 aaPredicted RBP9.17□□□□□ -0.94
CMTM1-210ENST00000528441 NHEJ1Q9H9Q4 299 aaPredicted RBP9.17□□□□□ -0.94
CMTM1-210ENST00000528441 PCDH18Q9HCL0 1135 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 NT5MQ9NPB1 228 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 RABGEF1Q9UJ41 708 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 COQ6Q9Y2Z9 468 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 MFHAS1Q9Y4C4 1052 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 NEUROG3Q9Y4Z2 214 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 WDR87Q6ZQQ6 2873 aa9.17□□□□□ -0.94
CMTM1-210ENST00000528441 CHD5Q8TDI0 1954 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 DCHS1Q96JQ0 3298 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.16□□□□□ -0.94
CMTM1-210ENST00000528441 LRRD1A4D1F6 860 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 PROSCO94903 275 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 CPP00450 1065 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 TMEM253P0C7T8 217 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 CTSEP14091 401 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 JUPP14923 745 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 ITIH2P19823 946 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 HTR1BP28222 390 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 CYLC1P35663 651 aaPredicted RBP9.16□□□□□ -0.94
CMTM1-210ENST00000528441 HSPA9P38646 679 aaKnown RBP9.16□□□□□ -0.94
CMTM1-210ENST00000528441 MMP13P45452 471 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 PPM1FP49593 454 aaPredicted RBP9.16□□□□□ -0.94
CMTM1-210ENST00000528441 MAXP61244 160 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 AP1S1P61966 158 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 HNRNPKP61978 463 aaKnown RBP eCLIP9.16□□□□□ -0.94
CMTM1-210ENST00000528441 SHC2P98077 582 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 DNAJC3Q13217 504 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 DPYSQ14117 519 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 ARHGEF7Q14155 803 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 ACOX1Q15067 660 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 SPA17Q15506 151 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 MARC1Q5VT66 337 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 TXNRD3NBQ6F5E7 133 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 TIGD7Q6NT04 549 aaPredicted RBP9.16□□□□□ -0.94
CMTM1-210ENST00000528441 POLNQ7Z5Q5 900 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 PARGQ86W56 976 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 SPATS2Q86XZ4 545 aaKnown RBP9.16□□□□□ -0.94
CMTM1-210ENST00000528441 RFX6Q8HWS3 928 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 RHOT2Q8IXI1 618 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 NIPA2Q8N8Q9 360 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 DENND6BQ8NEG7 585 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 ATL2Q8NHH9 583 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 SAP25Q8TEE9 199 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 ADAMTS14Q8WXS8 1223 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 FAM131CQ96AQ9 280 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 ZNF641Q96N77 438 aaPredicted RBP9.16□□□□□ -0.94
CMTM1-210ENST00000528441 CHP1Q99653 195 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 IL12RB2Q99665 862 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 CPEB1Q9BZB8 566 aaKnown RBP9.16□□□□□ -0.94
CMTM1-210ENST00000528441 SLC13A1Q9BZW2 595 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 ERVMER34-1Q9H9K5 563 aa9.16□□□□□ -0.94
CMTM1-210ENST00000528441 PDFQ9HBH1 243 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms