RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 HOOK1Q9UJC3 728 aaKnown RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 LAMP5Q9UJQ1 280 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 HPCAL4Q9UM19 191 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 SCAF8Q9UPN6 1271 aaKnown RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 CARD8Q9Y2G2 431 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 PCDHB2Q9Y5E7 798 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 AP1M2Q9Y6Q5 423 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 ZNF644Q9H582 1327 aaPredicted RBP3.32□□□□□ -1.88
COPB1-205ENST00000526527 YEATS2Q9ULM3 1422 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 LRRC9Q6ZRR7 1453 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 ABCC1P33527 1531 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 SAMD9LQ8IVG5 1584 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 MYO5CQ9NQX4 1742 aa3.32□□□□□ -1.88
COPB1-205ENST00000526527 CDC42BPAQ5VT25 1732 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 ARHGEF40Q8TER5 1519 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 GPATCH8Q9UKJ3 1502 aaKnown RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 CAMSAP2Q08AD1 1489 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 PLCH2O75038 1416 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 POGZQ7Z3K3 1410 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 SCAPERQ9BY12 1400 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 TRAPPC8Q9Y2L5 1435 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 CCNB3Q8WWL7 1395 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 NINLQ9Y2I6 1382 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 SOS1Q07889 1333 aaPredicted RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 GOLGA6L10A6NI86 522 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 CLIC1O00299 241 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 EBAG9O00559 213 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 SPTLC2O15270 562 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 RANBP6O60518 1105 aaKnown RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 NMT2O60551 498 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 TSPAN3O60637 253 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 PPP6R2O75170 966 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 TAF5LO75529 589 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 TGDSO95455 350 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 CER1O95813 267 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 FGBP02675 491 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 MT-ND3P03897 115 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 CD63P08962 238 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 TOP1P11387 765 aaKnown RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 CYP2A6P11509 494 aaPredicted RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 APEHP13798 732 aaKnown RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 CST5P28325 142 aaPredicted RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 NDUFS1P28331 727 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 CENPAP49450 140 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 OAZ1P54368 228 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 SLC12A2P55011 1212 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 ARL4CP56559 192 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 RBM6P78332 1123 aaKnown RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 GALNT1Q10472 559 aaPredicted RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 GRSF1Q12849 480 aaKnown RBP eCLIP3.31□□□□□ -1.88
COPB1-205ENST00000526527 PPFIA1Q13136 1202 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 GRM4Q14833 912 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 RCN1Q15293 331 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 TIGD6Q17RP2 521 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 FAM110CQ1W6H9 321 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 AAK1Q2M2I8 961 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 BTBD16Q32M84 506 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 HSP90AA5PQ58FG0 334 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 CAVIN4Q5BKX8 364 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 SPDYCQ5MJ68 293 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 HHATQ5VTY9 493 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 GRHL2Q6ISB3 625 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 SLC30A6Q6NXT4 461 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 MSANTD2Q6P1R3 559 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 KLC3Q6P597 504 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 PACS1Q6VY07 963 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 LDHAL6AQ6ZMR3 332 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 PLEKHM3Q6ZWE6 761 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 INTS8Q75QN2 995 aaKnown RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 ZNF771Q7L3S4 317 aaPredicted RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 GALNTL5Q7Z4T8 443 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 MRPL10Q7Z7H8 261 aaKnown RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 TBC1D1Q86TI0 1168 aaPredicted RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 SLC9B2Q86UD5 537 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 EPHX4Q8IUS5 362 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 CCDC13Q8IYE1 715 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 NUP93Q8N1F7 819 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 FSIP1Q8NA03 581 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 SPC24Q8NBT2 197 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 C16orf52Q8NHV5 167 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 ERMNQ8TAM6 284 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 OSR1Q8TAX0 266 aaPredicted RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 PIGOQ8TEQ8 1089 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 NSMCE1Q8WV22 266 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 ZNF606Q8WXB4 792 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 ASB12Q8WXK4 309 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 SDCCAG3Q96C92 435 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 COQ8BQ96D53 544 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 VPS39Q96JC1 886 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 ZSCAN31Q96LW9 406 aaPredicted RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 TRAPPC9Q96Q05 1148 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 PIGSQ96S52 555 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 HTATIP2Q9BUP3 242 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 PABPC3Q9H361 631 aaKnown RBP3.31□□□□□ -1.88
COPB1-205ENST00000526527 MROH8Q9H579 483 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 VPS45Q9NRW7 570 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 SAGE1Q9NXZ1 904 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 LPAR3Q9UBY5 353 aa3.31□□□□□ -1.88
COPB1-205ENST00000526527 STK39Q9UEW8 545 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms